############# Start of Description of junction: j38 # Number of strands: NUM_STRANDS = 2 LILLEY = HS4HS5 FINGERPRINT = 38 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1114 S1_NAME_ID3 = 1122 S1_NUM_ID5_ORIG = 1114 S1_NUM_ID3_ORIG = 1122 S1_NAME2_ID5 = 1115 S1_NAME2_ID3 = 1121 S1_NUM2_ID5_ORIG = 1115 S1_NUM2_ID3_ORIG = 1121 S1_SQ2 = UUAAGUG S1_SQLEN2 = 7 S1_SQ = AUUAAGUGU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1242 S2_NAME_ID3 = 1249 S2_NUM_ID5_ORIG = 1242 S2_NUM_ID3_ORIG = 1249 S2_NAME2_ID5 = 1243 S2_NAME2_ID3 = 1248 S2_NUM2_ID5_ORIG = 1243 S2_NUM2_ID3_ORIG = 1248 S2_SQ2 = CUCAAA S2_SQLEN2 = 6 S2_SQ = ACUCAAAU S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 1115 H1_OUTID2_ORIG = 1248 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 22.385047819809138 H1_P_Y = 97.27545740502431 H1_P_Z = 134.20272924808887 # Orientation: H1_DX_X = 0.943522663139948 H1_DX_Y = 0.04659057788629184 H1_DX_Z = -0.3280157041873508 H1_DY_X = 0.180971076838766 H1_DY_Y = -0.9017863274441567 H1_DY_Z = 0.3924676916417411 H1_DZ_X = -0.2775147806678362 H1_DZ_Y = -0.4296635168210088 H1_DZ_Z = -0.8592873843039399 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 2 H2_OUTID2 = 8 H2_INID2_ORIG = 1243 H2_OUTID2_ORIG = 1121 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 36.2662886621236 H2_P_Y = 111.89607619706868 H2_P_Z = 128.2930072674659 # Orientation: H2_DX_X = -0.4452607118108318 H2_DX_Y = -0.8898477095904553 H2_DX_Z = -0.09956883174137943 H2_DY_X = -0.8831809886873074 H2_DY_Y = 0.4547690327324858 H2_DY_Z = -0.11478879774998063 H2_DZ_X = 0.1474253700657684 H2_DZ_Y = 0.03682635746572771 H2_DZ_Z = -0.9883873631612232 ############# END of Description of junction: j38