############# Start of Description of junction: k1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS9HS9 FINGERPRINT = 169 LOOP_LENGTH_SUM = 18 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 5 S1_NAME_ID3 = 19 S1_NUM_ID5_ORIG = 5 S1_NUM_ID3_ORIG = 19 S1_NAME2_ID5 = 7 S1_NAME2_ID3 = 17 S1_NUM2_ID5_ORIG = 7 S1_NUM2_ID3_ORIG = 17 S1_SQ2 = GAGGUGCACAC S1_SQLEN2 = 11 S1_SQ = CUGAGGUGCACACAG S1_SQLEN = 15 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 5 S2_NAME_ID3 = 19 S2_NUM_ID5_ORIG = 5 S2_NUM_ID3_ORIG = 19 S2_NAME2_ID5 = 7 S2_NAME2_ID3 = 17 S2_NUM2_ID5_ORIG = 7 S2_NUM2_ID3_ORIG = 17 S2_SQ2 = GAGGUGCACAC S2_SQLEN2 = 11 S2_SQ = CUGAGGUGCACACAG S2_SQLEN = 15 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 7 H1_OUTID2_ORIG = 17 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 32.86473862138035 H1_P_Y = -8.060026627282028 H1_P_Z = 32.32994920914237 # Orientation: H1_DX_X = -0.8417899450731952 H1_DX_Y = -0.03362149199066167 H1_DX_Z = 0.5387571657528127 H1_DY_X = -0.1400098566815231 H1_DY_Y = -0.9503036828733666 H1_DY_Z = -0.27806501101241565 H1_DZ_X = 0.5213318793299564 H1_DZ_Y = -0.3095036439101051 H1_DZ_Z = 0.7952487447337901 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 3 H2_OUTID2 = 13 H2_INID2_ORIG = 7 H2_OUTID2_ORIG = 17 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 20.23328972347062 H2_P_Y = 7.89772949699622 H2_P_Z = -1.7620083487508538 # Orientation: H2_DX_X = -0.9281194045634251 H2_DX_Y = 0.003086995257516989 H2_DX_Z = 0.37226985015323977 H2_DY_X = 0.10109848604871274 H2_DY_Y = 0.964477319729272 H2_DY_Z = 0.2440544936003024 H2_DZ_X = -0.3582924322274934 H2_DZ_Y = 0.2641476295334124 H2_DZ_Z = -0.8954622062490318 ############# END of Description of junction: k1