#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS1HS1HS2HS2
FINGERPRINT = 11:11:165:169:171:176
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  6
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  6
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAGG
S1_SQLEN2 = 4
S1_SQ = UGAGGU
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 18
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 18
S2_NAME2_ID5 =  15
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  15
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = ACACA
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  14
S3_NAME_ID3 = 18
S3_NUM_ID5_ORIG =  14
S3_NUM_ID3_ORIG = 18
S3_NAME2_ID5 =  15
S3_NAME2_ID3 = 17
S3_NUM2_ID5_ORIG =  15
S3_NUM2_ID3_ORIG = 17
S3_SQ2 = CAC
S3_SQLEN2 = 3
S3_SQ = ACACA
S3_SQLEN = 5
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  6
S4_NAME_ID3 = 11
S4_NUM_ID5_ORIG =  6
S4_NUM_ID3_ORIG = 11
S4_NAME2_ID5 =  7
S4_NAME2_ID3 = 10
S4_NUM2_ID5_ORIG =  7
S4_NUM2_ID3_ORIG = 10
S4_SQ2 = GAGG
S4_SQLEN2 = 4
S4_SQ = UGAGGU
S4_SQLEN = 6
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 31.457142547189477
H1_P_Y = -7.224366788724736
H1_P_Z = 30.18277759836114
# Orientation:
H1_DX_X = -0.6382741823776286
H1_DX_Y = 0.4771239108366361
H1_DX_Z = 0.6041182349657426
H1_DY_X = -0.5664089862497512
H1_DY_Y = -0.8225328371039788
H1_DY_Z = 0.051191719850095296
H1_DZ_X = 0.5213318793299528
H1_DZ_Y = -0.30950364391010776
H1_DZ_Z = 0.7952487447337901
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 15
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 24.56617181137216
H2_P_Y = 1.1641282491907998
H2_P_Z = 15.01288416688623
# Orientation:
H2_DX_X = -0.1648731769063687
H2_DX_Y = -0.909116529079506
H2_DX_Z = -0.3825231654308414
H2_DY_X = 0.9194194725278706
H2_DY_Y = -0.0012653183035724602
H2_DY_Z = -0.3932762801214498
H2_DZ_X = 0.35704995319055044
H2_DZ_Y = -0.4165399566956598
H2_DZ_Z = 0.8360680566811549
## Properties of helix 3
H3_INID = 1
H3_OUTID = 5
H3_INID2 = 2
H3_OUTID2 = 4
H3_INID2_ORIG = 7
H3_OUTID2_ORIG = 17
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 21.20067929048485
H3_P_Y = 7.184530897256003
H3_P_Z = 0.6557396081215323
# Orientation:
H3_DX_X = -0.8396487970822513
H3_DX_Y = -0.5105190375800683
H3_DX_Z = 0.18536507175476813
H3_DY_X = -0.4081867594212696
H3_DY_Y = 0.818288666718658
H3_DY_Z = 0.40470634706286157
H3_DZ_X = -0.3582924322274934
H3_DZ_Y = 0.2641476295334133
H3_DZ_Z = -0.8954622062490323
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 2
H4_OUTID2 = 5
H4_INID2_ORIG = 15
H4_OUTID2_ORIG = 10
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 25.816933864519722
H4_P_Y = -0.8518621428643722
H4_P_Z = 18.195918976689843
# Orientation:
H4_DX_X = -0.012692426786831135
H4_DX_Y = 0.886576974923868
H4_DX_Z = 0.46240693100028807
H4_DY_X = 0.9548379685774293
H4_DY_Y = 0.14803663349101415
H4_DY_Z = -0.2576229976294364
H4_DZ_X = -0.2968557832773193
H4_DZ_Y = 0.4382538336164228
H4_DZ_Z = -0.848416301856183
#############  END of Description of junction: j1