#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 8:76:77:79:84:136
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.93565560508961
H1_P_Y = 126.91997132737514
H1_P_Z = 37.510002432587086
# Orientation:
H1_DX_X = -0.17987756839441005
H1_DX_Y = -0.9316669589794344
H1_DX_Z = 0.31565921170547995
H1_DY_X = -0.5630315689318408
H1_DY_Y = -0.1656203560113454
H1_DY_Z = -0.8096699019111568
H1_DZ_X = 0.806622286311665
H1_DZ_Y = -0.32336755437225406
H1_DZ_Z = -0.49476652272021937
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.76913771229745
H2_P_Y = 143.94450669780787
H2_P_Z = 56.29486742363361
# Orientation:
H2_DX_X = -0.6503778086936762
H2_DX_Y = 0.4319049704611473
H2_DX_Z = 0.6248734291436833
H2_DY_X = 0.23677415012950576
H2_DY_Y = -0.6663719922139819
H2_DY_Z = 0.7070264279524494
H2_DZ_X = 0.7217663803400995
H2_DZ_Y = 0.6077881740242503
H2_DZ_Z = 0.3311296237533412
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.593471524799263
H3_P_Y = 171.2365777385125
H3_P_Z = 66.41275002422768
# Orientation:
H3_DX_X = -0.7119161850441564
H3_DX_Y = 0.6867650012511604
H3_DX_Z = -0.14672824720780397
H3_DY_X = -0.3358385678653839
H3_DY_Y = -0.14944459419157852
H3_DY_Z = 0.9299885857369787
H3_DZ_X = 0.6167558688867949
H3_DZ_Y = 0.7113509305001458
H3_DZ_Z = 0.33703419985259586
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.05518174191773
H4_P_Y = 141.7990315567999
H4_P_Z = 69.39129597120953
# Orientation:
H4_DX_X = -0.7626940292820166
H4_DX_Y = -0.6329588557321131
H4_DX_Z = -0.13289433640241555
H4_DY_X = 0.5914182597990809
H4_DY_Y = -0.7657150212802435
H4_DY_Z = 0.252794280318966
H4_DZ_X = -0.26176756803271317
H4_DZ_Y = 0.1142085510636548
H4_DZ_Z = 0.9583496998435237
#############  END of Description of junction: j1