############# Start of Description of junction: j65 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS4HS4 FINGERPRINT = 35:72:87 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2351 S1_NAME_ID3 = 2358 S1_NUM_ID5_ORIG = 2351 S1_NUM_ID3_ORIG = 2358 S1_NAME2_ID5 = 2352 S1_NAME2_ID3 = 2357 S1_NUM2_ID5_ORIG = 2352 S1_NUM2_ID3_ORIG = 2357 S1_SQ2 = GAAGAG S1_SQLEN2 = 6 S1_SQ = CGAAGAGU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2328 S2_NAME_ID3 = 2333 S2_NUM_ID5_ORIG = 2328 S2_NUM_ID3_ORIG = 2333 S2_NAME2_ID5 = 2329 S2_NAME2_ID3 = 2332 S2_NUM2_ID5_ORIG = 2329 S2_NUM2_ID3_ORIG = 2332 S2_SQ2 = CUCA S2_SQLEN2 = 4 S2_SQ = UCUCAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2365 S3_NAME_ID3 = 2372 S3_NUM_ID5_ORIG = 2365 S3_NUM_ID3_ORIG = 2372 S3_NAME2_ID5 = 2366 S3_NAME2_ID3 = 2371 S3_NUM2_ID5_ORIG = 2366 S3_NUM2_ID3_ORIG = 2371 S3_SQ2 = CAAAAG S3_SQLEN2 = 6 S3_SQ = GCAAAAGA S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2352 H1_OUTID2_ORIG = 2332 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 84.71224430001025 H1_P_Y = 38.32402853432702 H1_P_Z = 108.61886339511611 # Orientation: H1_DX_X = -0.20109177906081754 H1_DX_Y = 0.9560255443212711 H1_DX_Z = 0.21348830178577316 H1_DY_X = -0.4550061334359583 H1_DY_Y = -0.2841634508305759 H1_DY_Z = 0.8439316037142532 H1_DZ_X = 0.8674857433582446 H1_DZ_Y = 0.07256922086719442 H1_DZ_Z = 0.49214042025921856 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 2366 H2_OUTID2_ORIG = 2357 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 75.32367415588163 H2_P_Y = 57.83890534191485 H2_P_Z = 98.98222726097451 # Orientation: H2_DX_X = 0.5468971270664298 H2_DX_Y = -0.6088601631259394 H2_DX_Z = -0.5746240807386442 H2_DY_X = -0.7796486949568049 H2_DY_Y = -0.12030926485191884 H2_DY_Z = -0.6145515383130657 H2_DZ_X = 0.3050433491467146 H2_DZ_Y = 0.7841013853763101 H2_DZ_Z = -0.5404938228993075 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 2 H3_OUTID2 = 7 H3_INID2_ORIG = 2329 H3_OUTID2_ORIG = 2371 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 79.61842132015214 H3_P_Y = 41.98454219562424 H3_P_Z = 87.98924416447863 # Orientation: H3_DX_X = 0.5692353150490561 H3_DX_Y = 0.2818664122181147 H3_DX_Z = 0.7723486788778047 H3_DY_X = 0.44082091057921957 H3_DY_Y = -0.8975910772917075 H3_DY_Z = 0.002680067614591053 H3_DZ_X = 0.6940087037617815 H3_DZ_Y = 0.338941858774632 H3_DZ_Z = -0.6351931481630544 ############# END of Description of junction: j65