############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 40.10175005378668 H1_P_Y = 128.69928533145355 H1_P_Z = 14.434923418768555 # Orientation: H1_DX_X = 0.11538105578672031 H1_DX_Y = -0.790361660383752 H1_DX_Z = 0.60167737015861 H1_DY_X = 0.6166524465308996 H1_DY_Y = 0.5318615528457258 H1_DY_Z = 0.5803990427214423 H1_DZ_X = -0.7787342114951556 H1_DZ_Y = 0.3040587680037845 H1_DZ_Z = 0.5487451990195797 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 60.98826368612357 H2_P_Y = 119.57003458700348 H2_P_Z = 1.477039613731649 # Orientation: H2_DX_X = -0.9407829957042111 H2_DX_Y = -0.3388171927411747 H2_DX_Z = 0.011413364832532746 H2_DY_X = -0.2269892811038119 H2_DY_Y = 0.6045534802560013 H2_DY_Z = -0.7635384442019486 H2_DZ_X = 0.25179996278352945 H2_DZ_Y = -0.7209146963499506 H2_DZ_Z = -0.6456615052245809 ############# END of Description of junction: j4