############# Start of Description of junction: j93 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 65:144:145 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 3066 S1_NAME_ID3 = 3080 S1_NUM_ID5_ORIG = 3066 S1_NUM_ID3_ORIG = 3080 S1_NAME2_ID5 = 3067 S1_NAME2_ID3 = 3079 S1_NUM2_ID5_ORIG = 3067 S1_NUM2_ID3_ORIG = 3079 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 3008 S2_NAME_ID3 = 3015 S2_NUM_ID5_ORIG = 3008 S2_NUM_ID3_ORIG = 3015 S2_NAME2_ID5 = 3009 S2_NAME2_ID3 = 3014 S2_NUM2_ID5_ORIG = 3009 S2_NUM2_ID3_ORIG = 3014 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 3102 S3_NAME_ID3 = 3115 S3_NUM_ID5_ORIG = 3102 S3_NUM_ID3_ORIG = 3115 S3_NAME2_ID5 = 3103 S3_NAME2_ID3 = 3114 S3_NUM2_ID5_ORIG = 3103 S3_NUM2_ID3_ORIG = 3114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 3067 H1_OUTID2_ORIG = 3014 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 58.14719578990429 H1_P_Y = 31.905858773626775 H1_P_Z = 118.5493094352981 # Orientation: H1_DX_X = 0.7689776553032601 H1_DX_Y = 0.4317292403989015 H1_DX_Z = -0.4714692234164346 H1_DY_X = 0.4063938036455639 H1_DY_Y = 0.23916282304171688 H1_DY_Z = 0.8818419475355057 H1_DZ_X = 0.4934748646109455 H1_DZ_Y = -0.8697189241699306 H1_DZ_Z = 0.008458778747609585 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 3103 H2_OUTID2_ORIG = 3079 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 38.04169776556198 H2_P_Y = 68.68508694799972 H2_P_Z = 118.07477681662282 # Orientation: H2_DX_X = 0.9015205869747405 H2_DX_Y = -0.008336522521986467 H2_DX_Z = 0.43265590675844123 H2_DY_X = 0.4250678684117801 H2_DY_Y = -0.17032795197211215 H2_DY_Z = -0.8889913925459894 H2_DZ_X = 0.08110449127261177 H2_DZ_Y = 0.9853521660651268 H2_DZ_Z = -0.15001056738171314 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 3009 H3_OUTID2_ORIG = 3114 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 54.23021842343233 H3_P_Y = 28.470986909688257 H3_P_Z = 100.41590539752583 # Orientation: H3_DX_X = -0.7087002002525082 H3_DX_Y = 0.33543011401927103 H3_DX_Z = 0.6206695294366114 H3_DY_X = -0.4335572789237574 H3_DY_Y = 0.48696145313231654 H3_DY_Z = -0.7582193805591402 H3_DZ_X = -0.5565717492419822 H3_DZ_Y = -0.8064460191310268 H3_DZ_Z = -0.19968151184684757 ############# END of Description of junction: j93