############# Start of Description of junction: j27 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS6HS3 FINGERPRINT = 73:78:145 LOOP_LENGTH_SUM = 11 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1442 S1_NAME_ID3 = 1453 S1_NUM_ID5_ORIG = 1442 S1_NUM_ID3_ORIG = 1453 S1_NAME2_ID5 = 1444 S1_NAME2_ID3 = 1451 S1_NUM2_ID5_ORIG = 1444 S1_NUM2_ID3_ORIG = 1451 S1_SQ2 = GGUUAGCC S1_SQLEN2 = 8 S1_SQ = AGGGUUAGCCGG S1_SQLEN = 12 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1414 S2_NAME_ID3 = 1422 S2_NUM_ID5_ORIG = 1414 S2_NUM_ID3_ORIG = 1422 S2_NAME2_ID5 = 1416 S2_NAME2_ID3 = 1420 S2_NUM2_ID5_ORIG = 1416 S2_NUM2_ID3_ORIG = 1420 S2_SQ2 = GGUUC S2_SQLEN2 = 5 S2_SQ = AGGGUUCCU S2_SQLEN = 9 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1674 S3_NAME_ID3 = 1681 S3_NUM_ID5_ORIG = 1674 S3_NUM_ID3_ORIG = 1681 S3_NAME2_ID5 = 1676 S3_NAME2_ID3 = 1679 S3_NUM2_ID5_ORIG = 1676 S3_NUM2_ID3_ORIG = 1679 S3_SQ2 = GUAC S3_SQLEN2 = 4 S3_SQ = CCGUACCG S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 1444 H1_OUTID2_ORIG = 1420 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 56.441024212190754 H1_P_Y = 173.21274506498386 H1_P_Z = 64.50837189018291 # Orientation: H1_DX_X = 0.2727473520288868 H1_DX_Y = 0.9479158083907748 H1_DX_Z = -0.16451292400331852 H1_DY_X = -0.8117913072165948 H1_DY_Y = 0.13497890885182073 H1_DY_Z = -0.5681334065980721 H1_DZ_X = -0.5163368624152227 H1_DZ_Y = 0.2885070438794628 H1_DZ_Z = 0.8063249531939078 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 3 H2_OUTID2 = 10 H2_INID2_ORIG = 1676 H2_OUTID2_ORIG = 1451 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 88.97287014736837 H2_P_Y = 172.59684266178363 H2_P_Z = 45.36823086540136 # Orientation: H2_DX_X = -0.12020958224756839 H2_DX_Y = -0.7326752371796772 H2_DX_Z = 0.6698780882814219 H2_DY_X = -0.5330379224526496 H2_DY_Y = -0.5216189697151776 H2_DY_Z = -0.6661713170503916 H2_DZ_X = 0.8375083459663131 H2_DZ_Y = -0.4371506002020169 H2_DZ_Z = -0.3278400878168881 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1416 H3_OUTID2_ORIG = 1679 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 80.40855435865454 H3_P_Y = 169.0327381219429 H3_P_Z = 64.45700516541605 # Orientation: H3_DX_X = -0.6163705568812645 H3_DX_Y = -0.2870414002283326 H3_DX_Z = 0.7332765993571826 H3_DY_X = 0.4208202765705096 H3_DY_Y = -0.9071429938424558 H3_DY_Z = -0.0013724247358197772 H3_DZ_X = 0.6655806723733804 H3_DZ_Y = 0.30773173914548124 H3_DZ_Z = 0.6799290737168775 ############# END of Description of junction: j27