############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:128:171 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 54.928207052651736 H1_P_Y = 156.04725240844175 H1_P_Z = 42.68843305737462 # Orientation: H1_DX_X = 0.20412077491418756 H1_DX_Y = 0.8286897665991262 H1_DX_Z = -0.5211602248659304 H1_DY_X = -0.7129027992542589 H1_DY_Y = -0.23901453028557285 H1_DY_Z = -0.6592735798800149 H1_DZ_X = -0.670898135385606 H1_DZ_Y = 0.5061080171724655 H1_DZ_Z = 0.5419874231842314 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 47.76045910438975 H2_P_Y = 153.09261026847605 H2_P_Z = 21.317845158816418 # Orientation: H2_DX_X = 0.43652095418514136 H2_DX_Y = 0.7752508449349591 H2_DX_Z = -0.4565474608240976 H2_DY_X = 0.20990081995304877 H2_DY_Y = -0.581199006050042 H2_DY_Z = -0.7862247523129042 H2_DZ_X = -0.8748663339849898 H2_DZ_Y = 0.24737389270913468 H2_DZ_Z = -0.41643133271355737 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.52919105959083 H3_P_Y = 148.6999885944753 H3_P_Z = 31.890986307785298 # Orientation: H3_DX_X = 0.6210455754941648 H3_DX_Y = 0.4180184771729216 H3_DX_Z = 0.6629954342988924 H3_DY_X = -0.12867386219107857 H3_DY_Y = -0.7800448951610406 H3_DY_Z = 0.6123503888478012 H3_DZ_X = 0.7731399810823092 H3_DZ_Y = -0.46560768279235276 H3_DZ_Z = -0.4306553789015055 ############# END of Description of junction: j1