############# Start of Description of junction: j90 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 64:144:145 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 3066 S1_NAME_ID3 = 3080 S1_NUM_ID5_ORIG = 3066 S1_NUM_ID3_ORIG = 3080 S1_NAME2_ID5 = 3067 S1_NAME2_ID3 = 3079 S1_NUM2_ID5_ORIG = 3067 S1_NUM2_ID3_ORIG = 3079 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 3008 S2_NAME_ID3 = 3015 S2_NUM_ID5_ORIG = 3008 S2_NUM_ID3_ORIG = 3015 S2_NAME2_ID5 = 3009 S2_NAME2_ID3 = 3014 S2_NUM2_ID5_ORIG = 3009 S2_NUM2_ID3_ORIG = 3014 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 3102 S3_NAME_ID3 = 3115 S3_NUM_ID5_ORIG = 3102 S3_NUM_ID3_ORIG = 3115 S3_NAME2_ID5 = 3103 S3_NAME2_ID3 = 3114 S3_NUM2_ID5_ORIG = 3103 S3_NUM2_ID3_ORIG = 3114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 3067 H1_OUTID2_ORIG = 3014 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 58.36208277757147 H1_P_Y = 32.12092845457474 H1_P_Z = 118.53020876802888 # Orientation: H1_DX_X = 0.7660624815999881 H1_DX_Y = 0.4327091608905036 H1_DX_Z = -0.47530101658453816 H1_DY_X = 0.40569616919974294 H1_DY_Y = 0.24805495859391868 H1_DY_Z = 0.8797041297013664 H1_DZ_X = 0.4985568097835156 H1_DZ_Y = -0.866736130317868 H1_DZ_Z = 0.014477148202729495 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 3103 H2_OUTID2_ORIG = 3079 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 38.07464245416621 H2_P_Y = 68.9108583565505 H2_P_Z = 118.11197665912145 # Orientation: H2_DX_X = 0.9043627378354842 H2_DX_Y = -0.012482173208127278 H2_DX_Z = 0.4265820363853976 H2_DY_X = 0.41798244723208455 H2_DY_Y = -0.1758322509383845 H2_DY_Z = -0.8912764404694116 H2_DZ_X = 0.08613194657377221 H2_DZ_Y = 0.9843410053847919 H2_DZ_Z = -0.15379880655410716 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 3009 H3_OUTID2_ORIG = 3114 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 54.49529191760378 H3_P_Y = 28.867289577558527 H3_P_Z = 100.08579950662957 # Orientation: H3_DX_X = -0.7194268731851352 H3_DX_Y = 0.3208602472033064 H3_DX_Z = 0.616014347157332 H3_DY_X = -0.4331312353267762 H3_DY_Y = 0.4860830246488952 H3_DY_Z = -0.759026103722718 H3_DZ_X = -0.5429754203675898 H3_DZ_Y = -0.8128788316304068 H3_DZ_Z = -0.2107265952931101 ############# END of Description of junction: j90