############# Start of Description of junction: k3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS4HS9 FINGERPRINT = 57 LOOP_LENGTH_SUM = 13 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1465 S1_NAME_ID3 = 1477 S1_NUM_ID5_ORIG = 1465 S1_NUM_ID3_ORIG = 1477 S1_NAME2_ID5 = 1466 S1_NAME2_ID3 = 1476 S1_NUM2_ID5_ORIG = 1466 S1_NUM2_ID3_ORIG = 1476 S1_SQ2 = CUAUGGCUAUG S1_SQLEN2 = 11 S1_SQ = GCUAUGGCUAUGC S1_SQLEN = 13 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2679 S2_NAME_ID3 = 2686 S2_NUM_ID5_ORIG = 2679 S2_NUM_ID3_ORIG = 2686 S2_NAME2_ID5 = 2680 S2_NAME2_ID3 = 2685 S2_NUM2_ID5_ORIG = 2680 S2_NUM2_ID3_ORIG = 2685 S2_SQ2 = UACCAA S2_SQLEN2 = 6 S2_SQ = GUACCAAC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 13 H1_INID2 = 2 H1_OUTID2 = 12 H1_INID2_ORIG = 1466 H1_OUTID2_ORIG = 1476 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 22.942963718323615 H1_P_Y = 138.10285706462815 H1_P_Z = 193.34362866687542 # Orientation: H1_DX_X = 0.6441675434147314 H1_DX_Y = -0.7132788382851629 H1_DX_Z = -0.2761910115583248 H1_DY_X = -0.7385883767210544 H1_DY_Y = -0.48618823026490077 H1_DY_Z = -0.46702057184285195 H1_DZ_X = 0.19883507181474158 H1_DZ_Y = 0.5048309653799663 H1_DZ_Z = -0.8400061372454104 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 2680 H2_OUTID2_ORIG = 2685 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 39.71858091240565 H2_P_Y = 124.04513920768989 H2_P_Z = 179.86410231933027 # Orientation: H2_DX_X = -0.36004264643501926 H2_DX_Y = -0.9055671087403852 H2_DX_Z = 0.22431563546857092 H2_DY_X = -0.7776744703175851 H2_DY_Y = 0.1584991087326273 H2_DY_Z = -0.608358817431963 H2_DZ_X = 0.515355907082025 H2_DZ_Y = -0.3934796616072589 H2_DZ_Z = -0.7613028601923872 ############# END of Description of junction: k3