#############  Start of Description of junction: j41
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS7HS11
FINGERPRINT = 75
LOOP_LENGTH_SUM = 18
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1050
S1_NAME_ID3 = 1064
S1_NUM_ID5_ORIG =  1050
S1_NUM_ID3_ORIG = 1064
S1_NAME2_ID5 =  1051
S1_NAME2_ID3 = 1063
S1_NUM2_ID5_ORIG =  1051
S1_NUM2_ID3_ORIG = 1063
S1_SQ2 = UCGCAUAGACAGC
S1_SQLEN2 = 13
S1_SQ = GUCGCAUAGACAGCC
S1_SQLEN = 15
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1117
S2_NAME_ID3 = 1127
S2_NUM_ID5_ORIG =  1117
S2_NUM_ID3_ORIG = 1127
S2_NAME2_ID5 =  1118
S2_NAME2_ID3 = 1126
S2_NUM2_ID5_ORIG =  1118
S2_NUM2_ID3_ORIG = 1126
S2_SQ2 = GUCGAGUGA
S2_SQLEN2 = 9
S2_SQ = GGUCGAGUGAC
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 2
H1_OUTID2 = 10
H1_INID2_ORIG = 1051
H1_OUTID2_ORIG = 1126
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 80.93617062052266
H1_P_Y = 63.558797697310304
H1_P_Z = 81.57742896203123
# Orientation:
H1_DX_X = 0.814141385047364
H1_DX_Y = 0.571415144733713
H1_DX_Z = 0.10324019334591128
H1_DY_X = -0.12691263571149136
H1_DY_Y = 0.3486039753503931
H1_DY_Z = -0.928637954892352
H1_DZ_X = -0.5666277332163645
H1_DZ_Y = 0.7429401057547338
H1_DZ_Z = 0.3563327254284019
## Properties of helix 2
H2_INID = 1
H2_OUTID = 15
H2_INID2 = 2
H2_OUTID2 = 14
H2_INID2_ORIG = 1118
H2_OUTID2_ORIG = 1063
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 104.07210225802987
H2_P_Y = 52.037206885225686
H2_P_Z = 93.81712858217308
# Orientation:
H2_DX_X = 0.07058990510300589
H2_DX_Y = -0.552007708286844
H2_DX_Z = 0.8308456868092122
H2_DY_X = 0.7638052021705874
H2_DY_Y = -0.5058077921105877
H2_DY_Z = -0.4009489875001151
H2_DZ_X = 0.6415751541594403
H2_DZ_Y = 0.6629072087646364
H2_DZ_Z = 0.38592143518231126
#############  END of Description of junction: j41