############# Start of Description of junction: j19 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS6HS4HS4 FINGERPRINT = 23:46:65:68:88:105 LOOP_LENGTH_SUM = 14 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1234 S1_NAME_ID3 = 1243 S1_NUM_ID5_ORIG = 1234 S1_NUM_ID3_ORIG = 1243 S1_NAME2_ID5 = 1236 S1_NAME2_ID3 = 1241 S1_NUM2_ID5_ORIG = 1236 S1_NUM2_ID3_ORIG = 1241 S1_SQ2 = ACAAUG S1_SQLEN2 = 6 S1_SQ = CUACAAUGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 942 S2_NAME_ID3 = 947 S2_NUM_ID5_ORIG = 942 S2_NUM_ID3_ORIG = 947 S2_NAME2_ID5 = 944 S2_NAME2_ID3 = 945 S2_NUM2_ID5_ORIG = 944 S2_NUM2_ID3_ORIG = 945 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = GUGGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1294 S3_NAME_ID3 = 1305 S3_NUM_ID5_ORIG = 1294 S3_NUM_ID3_ORIG = 1305 S3_NAME2_ID5 = 1296 S3_NAME2_ID3 = 1303 S3_NUM2_ID5_ORIG = 1296 S3_NUM2_ID3_ORIG = 1303 S3_SQ2 = CCCAGUUC S3_SQLEN2 = 8 S3_SQ = GGCCCAGUUCGG S3_SQLEN = 12 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1332 S4_NAME_ID3 = 1341 S4_NUM_ID5_ORIG = 1332 S4_NUM_ID3_ORIG = 1341 S4_NAME2_ID5 = 1334 S4_NAME2_ID3 = 1339 S4_NUM2_ID5_ORIG = 1334 S4_NUM2_ID3_ORIG = 1339 S4_SQ2 = GCCGGA S4_SQLEN2 = 6 S4_SQ = AAGCCGGAAU S4_SQLEN = 10 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 1236 H1_OUTID2_ORIG = 945 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 235.01798540875126 H1_P_Y = 114.6199582427846 H1_P_Z = -4.495514293709837 # Orientation: H1_DX_X = 0.9633751482726041 H1_DX_Y = -0.2548088182599173 H1_DX_Z = 0.08355112104406981 H1_DY_X = 0.12410620160039798 H1_DY_Y = 0.6998644391935187 H1_DY_Z = 0.7034112719289416 H1_DZ_X = -0.23770985342440554 H1_DZ_Y = -0.6672797261189203 H1_DZ_Z = 0.7058553624472967 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 1296 H2_OUTID2_ORIG = 1241 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 255.818814576222 H2_P_Y = 138.69220015207645 H2_P_Z = -8.315647179338256 # Orientation: H2_DX_X = 0.19574862882768684 H2_DX_Y = -0.8675198164701499 H2_DX_Z = 0.4572656146526288 H2_DY_X = 0.9298493441683604 H2_DY_Y = 0.3123314582346097 H2_DY_Z = 0.19449744817533343 H2_DZ_X = -0.31154882676997886 H2_DZ_Y = 0.38711552310465436 H2_DZ_Z = 0.8678011870870339 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 12 H3_INID2 = 3 H3_OUTID2 = 10 H3_INID2_ORIG = 1334 H3_OUTID2_ORIG = 1303 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 254.98342721189366 H3_P_Y = 115.74039956364628 H3_P_Z = -0.9649771389647821 # Orientation: H3_DX_X = -0.9483945809201657 H3_DX_Y = 0.2814349118486206 H3_DX_Z = -0.14608938795831428 H3_DY_X = -0.28517932148329805 H3_DY_Y = -0.9584615804431564 H3_DY_Z = 0.004914612162890575 H3_DZ_X = -0.13863792222767302 H3_DZ_Y = 0.04632266407647023 H3_DZ_Z = 0.9892591861151727 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 10 H4_INID2 = 3 H4_OUTID2 = 8 H4_INID2_ORIG = 944 H4_OUTID2_ORIG = 1339 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 227.92998725678262 H4_P_Y = 122.26882076805548 H4_P_Z = -19.109168037250598 # Orientation: H4_DX_X = -0.5227219402100616 H4_DX_Y = -0.6476905376404432 H4_DX_Z = 0.5543092464266444 H4_DY_X = 0.2465337792753246 H4_DY_Y = 0.5075837294512837 H4_DY_Z = 0.82557849613017 H4_DZ_X = -0.816077734593506 H4_DZ_Y = 0.5682039467016864 H4_DZ_Z = -0.10564755583246921 ############# END of Description of junction: j19