############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 61:65:107:119:126:171 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.3449296722932 H1_P_Y = 77.8955495272664 H1_P_Z = -17.31023231551672 # Orientation: H1_DX_X = 0.32735294226752387 H1_DX_Y = 0.3853261059029762 H1_DX_Z = 0.8627652306963114 H1_DY_X = -0.1840431754104941 H1_DY_Y = 0.9215874704037645 H1_DY_Z = -0.34176694395391394 H1_DZ_X = -0.92680535214987 H1_DZ_Y = -0.04690763801802689 H1_DZ_Z = 0.3726010100924988 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 144.3834559119349 H2_P_Y = 80.11173187939889 H2_P_Z = -25.80729074921675 # Orientation: H2_DX_X = 0.8865856426638175 H2_DX_Y = 0.21746283249851217 H2_DX_Z = 0.4082594943220279 H2_DY_X = 0.4202740805073404 H2_DY_Y = -0.7473818064325854 H2_DY_Z = -0.514577625501996 H2_DZ_X = 0.19322421037762183 H2_DZ_Y = 0.6277980183907061 H2_DZ_Z = -0.7540119711441271 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.67328151740372 H3_P_Y = 79.54606735925684 H3_P_Z = 1.2352890323656958 # Orientation: H3_DX_X = -0.3807379270272122 H3_DX_Y = 0.33771491297737555 H3_DX_Z = -0.8608061735813171 H3_DY_X = -0.855221079354294 H3_DY_Y = 0.22538193302874276 H3_DY_Z = 0.46669035740236353 H3_DZ_X = 0.3516184528023416 H3_DZ_Y = 0.9138663041259889 H3_DZ_Z = 0.20300946241980378 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.02955811348843 H4_P_Y = 64.53265354167125 H4_P_Z = -1.095114547237479 # Orientation: H4_DX_X = 0.711632967241286 H4_DX_Y = -0.3034548845166114 H4_DX_Z = -0.6336352681143758 H4_DY_X = 0.5447014317249739 H4_DY_Y = -0.3313010183995999 H4_DY_Z = 0.7704154629056766 H4_DZ_X = -0.4437103449460551 H4_DZ_Y = -0.8933950796094621 H4_DZ_Z = -0.07047241671363458 ############# END of Description of junction: j4