############# Start of Description of junction: k3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS4HS9 FINGERPRINT = 58 LOOP_LENGTH_SUM = 13 KISSING_LOOP = TRUE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1465 S1_NAME_ID3 = 1477 S1_NUM_ID5_ORIG = 1465 S1_NUM_ID3_ORIG = 1477 S1_NAME2_ID5 = 1466 S1_NAME2_ID3 = 1476 S1_NUM2_ID5_ORIG = 1466 S1_NUM2_ID3_ORIG = 1476 S1_SQ2 = CUAUGGCUAUG S1_SQLEN2 = 11 S1_SQ = GCUAUGGCUAUGC S1_SQLEN = 13 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2679 S2_NAME_ID3 = 2686 S2_NUM_ID5_ORIG = 2679 S2_NUM_ID3_ORIG = 2686 S2_NAME2_ID5 = 2680 S2_NAME2_ID3 = 2685 S2_NUM2_ID5_ORIG = 2680 S2_NUM2_ID3_ORIG = 2685 S2_SQ2 = UACCAA S2_SQLEN2 = 6 S2_SQ = GUACCAAC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 13 H1_INID2 = 2 H1_OUTID2 = 12 H1_INID2_ORIG = 1466 H1_OUTID2_ORIG = 1476 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 23.188848439297587 H1_P_Y = 138.25293305493605 H1_P_Z = 193.38585946394636 # Orientation: H1_DX_X = 0.6251522109816463 H1_DX_Y = -0.721629198041569 H1_DX_Z = -0.29738193226663157 H1_DY_X = -0.7591595309343937 H1_DY_Y = -0.4736979422578145 H1_DY_Z = -0.44641579955478505 H1_DZ_X = 0.18127746604645978 H1_DZ_Y = 0.5048381523167222 H1_DZ_Z = -0.8439649994337515 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 2680 H2_OUTID2_ORIG = 2685 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 39.9437166545438 H2_P_Y = 124.1865317717231 H2_P_Z = 179.8377044500445 # Orientation: H2_DX_X = -0.36454892882547796 H2_DX_Y = -0.9001627119796609 H2_DX_Z = 0.23835093969529453 H2_DY_X = -0.7780403891037011 H2_DY_Y = 0.1538119165263936 H2_DY_Z = -0.6090936276614798 H2_DZ_X = 0.5116221568848971 H2_DZ_Y = -0.4074910873821693 H2_DZ_Z = -0.7564349160955999 ############# END of Description of junction: k3