#############  Start of Description of junction: j31
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS6HS4HS4
FINGERPRINT = 29:54:62:64:91:102
LOOP_LENGTH_SUM = 14
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1235
S1_NAME_ID3 = 1242
S1_NUM_ID5_ORIG =  1235
S1_NUM_ID3_ORIG = 1242
S1_NAME2_ID5 =  1236
S1_NAME2_ID3 = 1241
S1_NUM2_ID5_ORIG =  1236
S1_NUM2_ID3_ORIG = 1241
S1_SQ2 = ACAAUG
S1_SQLEN2 = 6
S1_SQ = UACAAUGC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  943
S2_NAME_ID3 = 946
S2_NUM_ID5_ORIG =  943
S2_NUM_ID3_ORIG = 946
S2_NAME2_ID5 =  944
S2_NAME2_ID3 = 945
S2_NUM2_ID5_ORIG =  944
S2_NUM2_ID3_ORIG = 945
S2_SQ2 = GG
S2_SQLEN2 = 2
S2_SQ = UGGA
S2_SQLEN = 4
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  1295
S3_NAME_ID3 = 1304
S3_NUM_ID5_ORIG =  1295
S3_NUM_ID3_ORIG = 1304
S3_NAME2_ID5 =  1296
S3_NAME2_ID3 = 1303
S3_NUM2_ID5_ORIG =  1296
S3_NUM2_ID3_ORIG = 1303
S3_SQ2 = CCCAGUUC
S3_SQLEN2 = 8
S3_SQ = GCCCAGUUCG
S3_SQLEN = 10
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  1333
S4_NAME_ID3 = 1340
S4_NUM_ID5_ORIG =  1333
S4_NUM_ID3_ORIG = 1340
S4_NAME2_ID5 =  1334
S4_NAME2_ID3 = 1339
S4_NUM2_ID5_ORIG =  1334
S4_NUM2_ID3_ORIG = 1339
S4_SQ2 = GCCGGA
S4_SQLEN2 = 6
S4_SQ = AGCCGGAA
S4_SQLEN = 8
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 1236
H1_OUTID2_ORIG = 945
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 235.7718503197906
H1_P_Y = 116.50904851011222
H1_P_Z = -6.309131204647443
# Orientation:
H1_DX_X = 0.7713868899393219
H1_DX_Y = -0.5738053445782612
H1_DX_Z = -0.27515394339019394
H1_DY_X = 0.5876478157574354
H1_DY_Y = 0.4763809552731004
H1_DY_Z = 0.6540116436949699
H1_DZ_X = -0.2441972781691959
H1_DZ_Y = -0.66618962164425
H1_DZ_Z = 0.7046694809257987
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 2
H2_OUTID2 = 7
H2_INID2_ORIG = 1296
H2_OUTID2_ORIG = 1241
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 257.1423622225272
H2_P_Y = 137.44105397084056
H2_P_Z = -10.542070522553905
# Orientation:
H2_DX_X = -0.34303082339499724
H2_DX_Y = -0.9023883078552899
H2_DX_Z = 0.2608164029484943
H2_DY_X = 0.8738758716598909
H2_DY_Y = -0.20475106681996635
H2_DY_Z = 0.44092852206081723
H2_DZ_X = -0.3444863061597516
H2_DZ_Y = 0.37917323545067916
H2_DZ_Z = 0.8588112961450101
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 2
H3_OUTID2 = 9
H3_INID2_ORIG = 1334
H3_OUTID2_ORIG = 1303
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 256.1989018661652
H3_P_Y = 115.01372211784583
H3_P_Z = -5.560239489322353
# Orientation:
H3_DX_X = -0.5983754309320943
H3_DX_Y = 0.7989712637818798
H3_DX_Z = -0.0599313215909838
H3_DY_X = -0.7969345796956873
H3_DY_Y = -0.5857882891356212
H3_DY_Z = 0.14746984775483085
H3_DZ_X = 0.08271710428999768
H3_DZ_Y = 0.1360036762825132
H3_DZ_Z = 0.9872491482374253
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 944
H4_OUTID2_ORIG = 1339
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 229.9007421783952
H4_P_Y = 121.48276138566797
H4_P_Z = -18.3116269776796
# Orientation:
H4_DX_X = -0.5738509909855338
H4_DX_Y = -0.8188144476131498
H4_DX_Z = -0.015425320901353956
H4_DY_X = -0.0346809644943562
H4_DY_Y = 0.005478525602654827
H4_DY_Z = 0.9993834181428838
H4_DZ_X = -0.8182250734649017
H4_DZ_Y = 0.5740321298822977
H4_DZ_Z = -0.03154113213136256
#############  END of Description of junction: j31