############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 60:63:110:117:125:172 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.48437011682923 H1_P_Y = 77.86586972249339 H1_P_Z = -17.346651151222613 # Orientation: H1_DX_X = 0.31369278295389336 H1_DX_Y = 0.37708877265654905 H1_DX_Z = 0.8714361109450408 H1_DY_X = -0.18732701876501778 H1_DY_Y = 0.9243003990548715 H1_DY_Z = -0.3325317433683672 H1_DZ_X = -0.9308627320734502 H1_DZ_Y = -0.05893072070978178 H1_DZ_Z = 0.3605852800564229 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 144.11470911658483 H2_P_Y = 80.4329880659108 H2_P_Z = -25.545070101461945 # Orientation: H2_DX_X = 0.903265558120097 H2_DX_Y = 0.21723530907139832 H2_DX_Z = 0.3700272314392876 H2_DY_X = 0.3989121170095302 H2_DY_Y = -0.7428036576300343 H2_DY_Z = -0.5376912209757734 H2_DZ_X = 0.15805206236217373 H2_DZ_Y = 0.6332863070555845 H2_DZ_Z = -0.7576067574137433 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.9649207140728 H3_P_Y = 79.6696015021833 H3_P_Z = 1.1388009278995153 # Orientation: H3_DX_X = -0.40061448417631595 H3_DX_Y = 0.33429245783226236 H3_DX_Z = -0.8530865065774962 H3_DY_X = -0.836673578214743 H3_DY_Y = 0.24604789547889538 H3_DY_Z = 0.4893237748645749 H3_DZ_X = 0.3734773869800847 H3_DZ_Y = 0.9097851316475101 H3_DZ_Z = 0.1811233161347805 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.46518235595676 H4_P_Y = 65.02088491902174 H4_P_Z = -0.98547040744862 # Orientation: H4_DX_X = 0.6936249465267679 H4_DX_Y = -0.31029354266605935 H4_DX_Z = -0.6500787267212188 H4_DY_X = 0.5448255403750295 H4_DY_Y = -0.3643771376917613 H4_DY_Z = 0.7552446173807619 H4_DZ_X = -0.4712213536235197 H4_DZ_Y = -0.878036000917561 H4_DZ_Z = -0.0836852255891033 ############# END of Description of junction: j3