############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 146 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 117.07998323894223 H1_P_Y = 100.94091652351482 H1_P_Z = -18.00501436648447 # Orientation: H1_DX_X = 0.13285942620720448 H1_DX_Y = 0.9572851538458309 H1_DX_Z = 0.256814148937039 H1_DY_X = -0.9829761501162579 H1_DY_Y = 0.09408758987670751 H1_DY_Z = 0.15781449152024507 H1_DZ_X = 0.12691044547433705 H1_DZ_Y = -0.2734093262080819 H1_DZ_Z = 0.953488898295074 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 123.11820679387229 H2_P_Y = 112.06352931654575 H2_P_Z = -38.48803481029009 # Orientation: H2_DX_X = 0.18778256198039855 H2_DX_Y = -0.9821968322686985 H2_DX_Z = 0.005205006955215197 H2_DY_X = -0.8876300769875058 H2_DY_Y = -0.17196682942811492 H2_DY_Z = -0.4272473007563704 H2_DZ_X = 0.4205360339415023 H2_DZ_Y = 0.07560947201085355 H2_DZ_Z = -0.9041198216492035 ############# END of Description of junction: j11