############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 60:63:109:117:126:171 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 125.05259377473068 H1_P_Y = 77.54991507542809 H1_P_Z = -17.447018534661453 # Orientation: H1_DX_X = 0.30697894592898933 H1_DX_Y = 0.36786628219513773 H1_DX_Z = 0.877746162156388 H1_DY_X = -0.19608303535520122 H1_DY_Y = 0.9269369744911131 H1_DY_Z = -0.3199051243214974 H1_DZ_X = -0.9312976806597533 H1_DZ_Y = -0.07390699388552946 H1_DZ_Z = 0.35668247258954366 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 143.43720539280736 H2_P_Y = 80.21672113686596 H2_P_Z = -25.504115832030514 # Orientation: H2_DX_X = 0.8998910975304284 H2_DX_Y = 0.22007295160358353 H2_DX_Z = 0.37651548249434796 H2_DY_X = 0.4074340106943737 H2_DY_Y = -0.7321560664797886 H2_DY_Z = -0.5458434035933521 H2_DZ_X = 0.15554272568965644 H2_DZ_Y = 0.644604832660562 H2_DZ_Z = -0.7485259315452453 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.22562176539012 H3_P_Y = 79.17242661624631 H3_P_Z = 1.228193056640439 # Orientation: H3_DX_X = -0.3949440680224825 H3_DX_Y = 0.33502487042592577 H3_DX_Z = -0.8554399565895601 H3_DY_X = -0.8484348823318157 H3_DY_Y = 0.22414816636562307 H3_DY_Z = 0.47949541182111544 H3_DZ_X = 0.35238818592063126 H3_DZ_Y = 0.915158967453749 H3_DZ_Z = 0.19572079785385688 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 127.84135555061764 H4_P_Y = 64.46683597497041 H4_P_Z = -0.8843572287950519 # Orientation: H4_DX_X = 0.7101979545229824 H4_DX_Y = -0.2969837170563494 H4_DX_Z = -0.6382942402957967 H4_DY_X = 0.5479710454524707 H4_DY_Y = -0.33601819220106677 H4_DY_Z = 0.7660414530922282 H4_DZ_X = -0.44198031487511 H4_DZ_Y = -0.8938078352270793 H4_DZ_Z = -0.07590095486597259 ############# END of Description of junction: j3