############# Start of Description of junction: j12 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 116.95159557431018 H1_P_Y = 100.90857171796436 H1_P_Z = -18.109746167975686 # Orientation: H1_DX_X = 0.1328316404980967 H1_DX_Y = 0.959573142899373 H1_DX_Z = 0.24814338336699038 H1_DY_X = -0.9797518440790611 H1_DY_Y = 0.08928256649392097 H1_DY_Z = 0.17920643778595036 H1_DZ_X = 0.1498068066085665 H1_DZ_Y = -0.26692322256874945 H1_DZ_Z = 0.9520031060596672 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 123.18062363210473 H2_P_Y = 111.67458129869875 H2_P_Z = -37.895839984064615 # Orientation: H2_DX_X = 0.1990807418025895 H2_DX_Y = -0.9799640784399486 H2_DX_Z = -0.006104359972283646 H2_DY_X = -0.8815873116891026 H2_DY_Y = -0.17636805967084968 H2_DY_Z = -0.4378334379609541 H2_DZ_X = 0.4279844274177549 H2_DZ_Y = 0.09254573191279292 H2_DZ_Z = -0.8990353816133236 ############# END of Description of junction: j12