############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 3 LILLEY = 3HS19 FINGERPRINT = 34:121:155 LOOP_LENGTH_SUM = 19 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 176 S1_NAME_ID3 = 200 S1_NUM_ID5_ORIG = 176 S1_NUM_ID3_ORIG = 200 S1_NAME2_ID5 = 178 S1_NAME2_ID3 = 198 S1_NUM2_ID5_ORIG = 178 S1_NUM2_ID3_ORIG = 198 S1_SQ2 = CAUGUGGACCCGCGUCCAAAG S1_SQLEN2 = 21 S1_SQ = CCCAUGUGGACCCGCGUCCAAAGGG S1_SQLEN = 25 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 141 S2_NAME_ID3 = 146 S2_NUM_ID5_ORIG = 141 S2_NUM_ID3_ORIG = 146 S2_NAME2_ID5 = 143 S2_NAME2_ID3 = 144 S2_NUM2_ID5_ORIG = 143 S2_NUM2_ID3_ORIG = 144 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = AGAGGG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 217 S3_NAME_ID3 = 222 S3_NUM_ID5_ORIG = 217 S3_NUM_ID3_ORIG = 222 S3_NAME2_ID5 = 219 S3_NAME2_ID3 = 220 S3_NUM2_ID5_ORIG = 219 S3_NUM2_ID3_ORIG = 220 S3_SQ2 = CG S3_SQLEN2 = 2 S3_SQ = CCCGCU S3_SQLEN = 6 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 178 H1_OUTID2_ORIG = 144 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 95.47781092317662 H1_P_Y = 38.91120720733253 H1_P_Z = -2.901527285572765 # Orientation: H1_DX_X = -0.6958100039002346 H1_DX_Y = -0.5978898380114614 H1_DX_Z = -0.397965048810792 H1_DY_X = 0.6861796180644006 H1_DY_Y = -0.38971941577047176 H1_DY_Z = -0.6142282220189186 H1_DZ_X = 0.2121461058453491 H1_DZ_Y = -0.7004616467545901 H1_DZ_Z = 0.6814304888985383 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 219 H2_OUTID2_ORIG = 198 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 87.2930493990657 H2_P_Y = 47.30716182572266 H2_P_Z = 11.936004428835957 # Orientation: H2_DX_X = 0.9090676885056013 H2_DX_Y = -0.0949266690685846 H2_DX_Z = 0.40569060281775116 H2_DY_X = -0.20071894318299144 H2_DY_Y = 0.7534859949021495 H2_DY_Z = 0.6260756833912495 H2_DZ_X = -0.3651134666957603 H2_DZ_Y = -0.6505749633868945 H2_DZ_Z = 0.6659161910117088 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 3 H3_OUTID2 = 4 H3_INID2_ORIG = 143 H3_OUTID2_ORIG = 220 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 94.66086829816295 H3_P_Y = 60.31720569248261 H3_P_Z = -1.5559584191754556 # Orientation: H3_DX_X = 0.3657511548840091 H3_DX_Y = -0.8636282650365459 H3_DX_Z = -0.3469471321844102 H3_DY_X = -0.5814014547211457 H3_DY_Y = 0.0790817023199466 H3_DY_Z = -0.8097644304403051 H3_DZ_X = 0.7267726199776376 H3_DZ_Y = 0.4978878429808731 H3_DZ_Z = -0.47319050567683707 ############# END of Description of junction: j3