############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 116.78401458010522 H1_P_Y = 100.63181357649245 H1_P_Z = -18.243386447921793 # Orientation: H1_DX_X = 0.12542961642803618 H1_DX_Y = 0.962352194469176 H1_DX_Z = 0.24113412268500056 H1_DY_X = -0.9797849863574157 H1_DY_Y = 0.08197664858018072 H1_DY_Z = 0.1824861901518844 H1_DZ_X = 0.15584861831693786 H1_DZ_Y = -0.2591487659394005 H1_DZ_Z = 0.9531805313164874 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 123.08951822133082 H2_P_Y = 111.64834982396793 H2_P_Z = -38.31308902288996 # Orientation: H2_DX_X = 0.20800518618065666 H2_DX_Y = -0.9781274540592335 H2_DX_Z = -7.253533977831239E-4 H2_DY_X = -0.8819542036242183 H2_DY_Y = -0.18723254817636814 H2_DY_Z = -0.43255144851562477 H2_DZ_X = 0.42295463732122585 H2_DZ_Y = 0.09061267305949627 H2_DZ_Z = -0.9016089608302948 ############# END of Description of junction: j13