############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 148 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 261 S1_NAME_ID3 = 268 S1_NUM_ID5_ORIG = 261 S1_NUM_ID3_ORIG = 268 S1_NAME2_ID5 = 263 S1_NAME2_ID3 = 266 S1_NUM2_ID5_ORIG = 263 S1_NUM2_ID3_ORIG = 266 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = ACAGACUA S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 307 S2_NAME_ID3 = 313 S2_NUM_ID5_ORIG = 307 S2_NUM_ID3_ORIG = 313 S2_NAME2_ID5 = 309 S2_NAME2_ID3 = 311 S2_NUM2_ID5_ORIG = 309 S2_NUM2_ID3_ORIG = 311 S2_SQ2 = GUC S2_SQLEN2 = 3 S2_SQ = UAGUCGG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 263 H1_OUTID2_ORIG = 311 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 35.7590042007325 H1_P_Y = 21.276882904467712 H1_P_Z = 14.986808839459622 # Orientation: H1_DX_X = 0.038603179140523025 H1_DX_Y = 0.8781632388381162 H1_DX_Z = -0.47680092335648006 H1_DY_X = 0.979924595391509 H1_DY_Y = -0.1266681938050347 H1_DY_Z = -0.1539576436067911 H1_DZ_X = -0.1955954547197578 H1_DZ_Y = -0.4612856974061934 H1_DZ_Z = -0.8654235514830013 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 309 H2_OUTID2_ORIG = 266 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 39.95956062960629 H2_P_Y = 27.577380537634426 H2_P_Z = 31.767146604831975 # Orientation: H2_DX_X = -0.8350013425240093 H2_DX_Y = -0.1278688621309243 H2_DX_Z = 0.5351843720442879 H2_DY_X = 0.1256678930809798 H2_DY_Y = -0.9912346042148279 H2_DY_Z = -0.040761992783227896 H2_DZ_X = 0.5357054588406669 H2_DZ_Y = 0.033219173746722674 H2_DZ_Z = 0.8437512357702879 ############# END of Description of junction: j4