############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS4HS4 FINGERPRINT = 38:72:86 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2351 S1_NAME_ID3 = 2358 S1_NUM_ID5_ORIG = 2351 S1_NUM_ID3_ORIG = 2358 S1_NAME2_ID5 = 2352 S1_NAME2_ID3 = 2357 S1_NUM2_ID5_ORIG = 2352 S1_NUM2_ID3_ORIG = 2357 S1_SQ2 = GAAGAG S1_SQLEN2 = 6 S1_SQ = CGAAGAGU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2328 S2_NAME_ID3 = 2333 S2_NUM_ID5_ORIG = 2328 S2_NUM_ID3_ORIG = 2333 S2_NAME2_ID5 = 2329 S2_NAME2_ID3 = 2332 S2_NUM2_ID5_ORIG = 2329 S2_NUM2_ID3_ORIG = 2332 S2_SQ2 = CUCA S2_SQLEN2 = 4 S2_SQ = UCUCAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2365 S3_NAME_ID3 = 2372 S3_NUM_ID5_ORIG = 2365 S3_NUM_ID3_ORIG = 2372 S3_NAME2_ID5 = 2366 S3_NAME2_ID3 = 2371 S3_NUM2_ID5_ORIG = 2366 S3_NUM2_ID3_ORIG = 2371 S3_SQ2 = CAAAAG S3_SQLEN2 = 6 S3_SQ = GCAAAAGA S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2352 H1_OUTID2_ORIG = 2332 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 84.63101896216 H1_P_Y = 38.196259048824885 H1_P_Z = 107.87460313192925 # Orientation: H1_DX_X = -0.1767495298073527 H1_DX_Y = 0.9592060032339447 H1_DX_Z = 0.22064325748327462 H1_DY_X = -0.4523365803769508 H1_DY_Y = -0.2782586408150749 H1_DY_Z = 0.847327414205779 H1_DZ_X = 0.8741574353431787 H1_DZ_Y = 0.049959705480539185 H1_DZ_Z = 0.4830660473087818 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 2366 H2_OUTID2_ORIG = 2357 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 75.28341618116995 H2_P_Y = 57.38486960807618 H2_P_Z = 98.77854098296785 # Orientation: H2_DX_X = 0.5575509945786195 H2_DX_Y = -0.5600373666973368 H2_DX_Z = -0.6127764978743215 H2_DY_X = -0.773840709229674 H2_DY_Y = -0.08341538141808513 H2_DY_Z = -0.6278633855241225 H2_DZ_X = 0.3005119717803666 H2_DZ_Y = 0.8242572547728031 H2_DZ_Z = -0.47988804191298584 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 2 H3_OUTID2 = 7 H3_INID2_ORIG = 2329 H3_OUTID2_ORIG = 2371 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 79.17116174765358 H3_P_Y = 41.97484886850286 H3_P_Z = 87.56651823102996 # Orientation: H3_DX_X = 0.5816396155171475 H3_DX_Y = 0.27919306881504724 H3_DX_Z = 0.7640331066038328 H3_DY_X = 0.43141899290098706 H3_DY_Y = -0.902150833488399 H3_DY_Z = 0.0012353948667822578 H3_DZ_X = 0.6896180176194378 H3_DZ_Y = 0.3288998387987192 H3_DZ_Z = -0.645175856501794 ############# END of Description of junction: j4