############# Start of Description of junction: j8 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS2HS5 FINGERPRINT = 17:161:171 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2578 S1_NAME_ID3 = 2584 S1_NUM_ID5_ORIG = 2578 S1_NUM_ID3_ORIG = 2584 S1_NAME2_ID5 = 2580 S1_NAME2_ID3 = 2582 S1_NUM2_ID5_ORIG = 2580 S1_NUM2_ID3_ORIG = 2582 S1_SQ2 = GUG S1_SQLEN2 = 3 S1_SQ = GGGUGAG S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2550 S2_NAME_ID3 = 2557 S2_NUM_ID5_ORIG = 2550 S2_NUM_ID3_ORIG = 2557 S2_NAME2_ID5 = 2552 S2_NAME2_ID3 = 2555 S2_NUM2_ID5_ORIG = 2552 S2_NUM2_ID3_ORIG = 2555 S2_SQ2 = CAUC S2_SQLEN2 = 4 S2_SQ = UCCAUCCU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2594 S3_NAME_ID3 = 2604 S3_NUM_ID5_ORIG = 2594 S3_NUM_ID3_ORIG = 2604 S3_NAME2_ID5 = 2596 S3_NAME2_ID3 = 2602 S3_NUM2_ID5_ORIG = 2596 S3_NUM2_ID3_ORIG = 2602 S3_SQ2 = AUUAAAG S3_SQLEN2 = 7 S3_SQ = CUAUUAAAGGA S3_SQLEN = 11 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 2580 H1_OUTID2_ORIG = 2555 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 59.7474789987625 H1_P_Y = 122.71474955889443 H1_P_Z = 141.81954777127373 # Orientation: H1_DX_X = 0.6059702951510388 H1_DX_Y = 0.6888051636492207 H1_DX_Z = 0.3979289483371815 H1_DY_X = -0.739144364318868 H1_DY_Y = 0.6724504659971586 H1_DY_Z = -0.03841847831256473 H1_DZ_X = -0.29405035298434257 H1_DZ_Y = -0.2708464829204331 H1_DZ_Z = 0.9166114621798158 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 3 H2_OUTID2 = 5 H2_INID2_ORIG = 2596 H2_OUTID2_ORIG = 2582 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 79.98425059707567 H2_P_Y = 128.56999616343722 H2_P_Z = 126.39341269526324 # Orientation: H2_DX_X = 0.2727166648168975 H2_DX_Y = 0.9580437374283406 H2_DX_Z = 0.08819193787100232 H2_DY_X = 0.9611944168120772 H2_DY_Y = -0.27527840380929547 H2_DY_Z = 0.01808572601579783 H2_DZ_X = 0.04160425243225063 H2_DZ_Y = 0.07983731940962002 H2_DZ_Z = -0.995939299660904 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 11 H3_INID2 = 3 H3_OUTID2 = 9 H3_INID2_ORIG = 2552 H3_OUTID2_ORIG = 2602 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 62.792574705331674 H3_P_Y = 127.53261057363154 H3_P_Z = 125.32612041875136 # Orientation: H3_DX_X = 0.24946125541842434 H3_DX_Y = -0.9675682361412044 H3_DX_Z = -0.03975915562061516 H3_DY_X = -0.9137119629411359 H3_DY_Y = -0.2215784831545733 H3_DY_Z = -0.34063679275904235 H3_DZ_X = 0.3207795673407503 H3_DZ_Y = 0.12130409809037701 H3_DZ_Z = -0.9393539189055105 ############# END of Description of junction: j8