############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS16HS3 FINGERPRINT = 68:132:160 LOOP_LENGTH_SUM = 20 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2362 S1_NAME_ID3 = 2383 S1_NUM_ID5_ORIG = 2362 S1_NUM_ID3_ORIG = 2383 S1_NAME2_ID5 = 2364 S1_NAME2_ID3 = 2381 S1_NUM2_ID5_ORIG = 2364 S1_NUM2_ID3_ORIG = 2381 S1_SQ2 = AGCAAAAGAUAGCUUGAC S1_SQLEN2 = 18 S1_SQ = AGAGCAAAAGAUAGCUUGACAG S1_SQLEN = 22 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2416 S2_NAME_ID3 = 2424 S2_NUM_ID5_ORIG = 2416 S2_NUM_ID3_ORIG = 2424 S2_NAME2_ID5 = 2418 S2_NAME2_ID3 = 2422 S2_NUM2_ID5_ORIG = 2418 S2_NUM2_ID3_ORIG = 2422 S2_SQ2 = GUGGU S2_SQLEN2 = 5 S2_SQ = GCGUGGUCU S2_SQLEN = 9 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2405 S3_NAME_ID3 = 2411 S3_NUM_ID5_ORIG = 2405 S3_NUM_ID3_ORIG = 2411 S3_NAME2_ID5 = 2407 S3_NAME2_ID3 = 2409 S3_NUM2_ID5_ORIG = 2407 S3_NUM2_ID3_ORIG = 2409 S3_SQ2 = GAC S3_SQLEN2 = 3 S3_SQ = CUGACGC S3_SQLEN = 7 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 2364 H1_OUTID2_ORIG = 2422 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 76.71684712238556 H1_P_Y = 63.14467762999389 H1_P_Z = 90.28916396022267 # Orientation: H1_DX_X = -0.9573744349999771 H1_DX_Y = 0.006477691973444166 H1_DX_Z = -0.28877712983403114 H1_DY_X = -0.20037091884054803 H1_DY_Y = 0.7052034496499289 H1_DY_Z = 0.6801026315820593 H1_DZ_X = 0.20805212349667102 H1_DZ_Y = 0.7089754114978462 H1_DZ_Z = -0.6738458130759426 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 2407 H2_OUTID2_ORIG = 2381 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 66.32628838620148 H2_P_Y = 55.27669890456131 H2_P_Z = 70.29490388707919 # Orientation: H2_DX_X = 0.34404970378436417 H2_DX_Y = 0.38614319421794363 H2_DX_Z = -0.8558757122883236 H2_DY_X = -0.812238224648155 H2_DY_Y = -0.33490496154421123 H2_DY_Z = -0.47760625326044703 H2_DZ_X = -0.4710614267229971 H2_DZ_Y = 0.859495259028364 H2_DZ_Z = 0.19841630971635027 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 2418 H3_OUTID2_ORIG = 2409 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 71.74255928791116 H3_P_Y = 35.11865705216801 H3_P_Z = 70.62490744938177 # Orientation: H3_DX_X = 0.812453046783773 H3_DX_Y = 0.3472160951366803 H3_DX_Z = 0.4683599364268929 H3_DY_X = -0.47762405140136366 H3_DY_Y = -0.06432017078398644 H3_DY_Z = 0.8762067000161835 H3_DZ_X = 0.3343580600115672 H3_DZ_Y = -0.9355767733908067 H3_DZ_Z = 0.11358163934784216 ############# END of Description of junction: j3