############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS6 FINGERPRINT = 167 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2604 S1_NAME_ID3 = 2615 S1_NUM_ID5_ORIG = 2604 S1_NUM_ID3_ORIG = 2615 S1_NAME2_ID5 = 2606 S1_NAME2_ID3 = 2613 S1_NUM2_ID5_ORIG = 2606 S1_NUM2_ID3_ORIG = 2613 S1_SQ2 = GUCGUGAG S1_SQLEN2 = 8 S1_SQ = AGGUCGUGAGCU S1_SQLEN = 12 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2543 S2_NAME_ID3 = 2550 S2_NUM_ID5_ORIG = 2543 S2_NUM_ID3_ORIG = 2550 S2_NAME2_ID5 = 2545 S2_NAME2_ID3 = 2548 S2_NUM2_ID5_ORIG = 2545 S2_NUM2_ID3_ORIG = 2548 S2_SQ2 = UUCC S2_SQLEN2 = 4 S2_SQ = GGUUCCCU S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 2606 H1_OUTID2_ORIG = 2548 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 61.27032545494627 H1_P_Y = 126.83195880582822 H1_P_Z = 129.19744438562853 # Orientation: H1_DX_X = -0.9284240117012104 H1_DX_Y = -0.17037010241978123 H1_DX_Z = -0.33015584607588266 H1_DY_X = 0.19739469583202407 H1_DY_Y = -0.9790548974983153 H1_DY_Z = -0.04986824382251598 H1_DZ_X = -0.31474464023077076 H1_DZ_Y = -0.11146988779950107 H1_DZ_Z = 0.9426082301571341 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 12 H2_INID2 = 3 H2_OUTID2 = 10 H2_INID2_ORIG = 2545 H2_OUTID2_ORIG = 2613 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 69.45091300075669 H2_P_Y = 130.32621088734797 H2_P_Z = 105.62037003051736 # Orientation: H2_DX_X = 0.4214644442050144 H2_DX_Y = 0.8768020397655505 H2_DX_Z = 0.23148629621188377 H2_DY_X = 0.7570936445975178 H2_DY_Y = -0.4807211022076956 H2_DY_Z = 0.4423985027124928 H2_DZ_X = 0.4991762570284948 H2_DZ_Y = -0.011198435389417227 H2_DZ_Z = -0.8664281040362454 ############# END of Description of junction: j9