############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 155 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2523 S1_NAME_ID3 = 2531 S1_NUM_ID5_ORIG = 2523 S1_NUM_ID3_ORIG = 2531 S1_NAME2_ID5 = 2525 S1_NAME2_ID3 = 2529 S1_NUM2_ID5_ORIG = 2525 S1_NUM2_ID3_ORIG = 2529 S1_SQ2 = GCUUG S1_SQLEN2 = 5 S1_SQ = UGGCUUGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2490 S2_NAME_ID3 = 2497 S2_NUM_ID5_ORIG = 2490 S2_NUM_ID3_ORIG = 2497 S2_NAME2_ID5 = 2492 S2_NAME2_ID3 = 2495 S2_NUM2_ID5_ORIG = 2492 S2_NUM2_ID3_ORIG = 2495 S2_SQ2 = UCGU S2_SQLEN2 = 4 S2_SQ = AGUCGUCA S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 2525 H1_OUTID2_ORIG = 2495 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 65.2852328555724 H1_P_Y = 99.77980833162198 H1_P_Z = 128.03898787363676 # Orientation: H1_DX_X = 0.42509961334816637 H1_DX_Y = 0.9051038163976557 H1_DX_Z = -0.00879774253070309 H1_DY_X = -0.8333033136269279 H1_DY_Y = 0.39513509908769606 H1_DY_Z = 0.38661846951140433 H1_DZ_X = 0.3534061491112226 H1_DZ_Y = -0.15702017389928358 H1_DZ_Z = 0.9221977872230127 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 2492 H2_OUTID2_ORIG = 2529 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 64.03564968062634 H2_P_Y = 109.28800527359465 H2_P_Z = 106.2032815693207 # Orientation: H2_DX_X = -0.13100382459247584 H2_DX_Y = -0.9852516385797685 H2_DX_Z = -0.11007818411489723 H2_DY_X = -0.9887369471728746 H2_DY_Y = 0.1379517484359809 H2_DY_Z = -0.058039334926633046 H2_DZ_X = 0.07236882780185283 H2_DZ_Y = 0.10123499285990079 H2_DZ_Z = -0.9922269039807645 ############# END of Description of junction: j5