############# Start of Description of junction: j87 # Number of strands: NUM_STRANDS = 3 LILLEY = HS4HS10HS11 FINGERPRINT = 63:143:147 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 66 S1_NAME_ID3 = 80 S1_NUM_ID5_ORIG = 66 S1_NUM_ID3_ORIG = 80 S1_NAME2_ID5 = 67 S1_NAME2_ID3 = 79 S1_NUM2_ID5_ORIG = 67 S1_NUM2_ID3_ORIG = 79 S1_SQ2 = CGUUCCGGGGAGU S1_SQLEN2 = 13 S1_SQ = GCGUUCCGGGGAGUA S1_SQLEN = 15 S1_CHAR = 9 ## Properties of strand 2 S2_NAME_ID5 = 8 S2_NAME_ID3 = 15 S2_NUM_ID5_ORIG = 8 S2_NUM_ID3_ORIG = 15 S2_NAME2_ID5 = 9 S2_NAME2_ID3 = 14 S2_NUM2_ID5_ORIG = 9 S2_NUM2_ID3_ORIG = 14 S2_SQ2 = CCACAG S2_SQLEN2 = 6 S2_SQ = GCCACAGC S2_SQLEN = 8 S2_CHAR = 9 ## Properties of strand 3 S3_NAME_ID5 = 102 S3_NAME_ID3 = 115 S3_NUM_ID5_ORIG = 102 S3_NUM_ID3_ORIG = 115 S3_NAME2_ID5 = 103 S3_NAME2_ID3 = 114 S3_NUM2_ID5_ORIG = 103 S3_NUM2_ID3_ORIG = 114 S3_SQ2 = AAACCCGGUUCG S3_SQLEN2 = 12 S3_SQ = GAAACCCGGUUCGC S3_SQLEN = 14 S3_CHAR = 9 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 67 H1_OUTID2_ORIG = 14 H1_INSEQ_CHAR = 9 H1_OUTSEQ_CHAR = 9 # Position: H1_P_X = 57.653719040947756 H1_P_Y = 31.48124366026978 H1_P_Z = 117.89207102547537 # Orientation: H1_DX_X = 0.7915094646843741 H1_DX_Y = 0.38636781863561254 H1_DX_Z = -0.4735321277778297 H1_DY_X = 0.4075968105907606 H1_DY_Y = 0.24361095258775833 H1_DY_Z = 0.8800673518404807 H1_DZ_X = 0.4553873157118957 H1_DZ_Y = -0.8895918235359659 H1_DZ_Z = 0.035338084083193166 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 15 H2_INID2 = 2 H2_OUTID2 = 14 H2_INID2_ORIG = 103 H2_OUTID2_ORIG = 79 H2_INSEQ_CHAR = 9 H2_OUTSEQ_CHAR = 9 # Position: H2_P_X = 37.66640183702449 H2_P_Y = 68.03993399013909 H2_P_Z = 117.517055316733 # Orientation: H2_DX_X = 0.8986776281742976 H2_DX_Y = -0.011124222401392103 H2_DX_Z = 0.43846866740393864 H2_DY_X = 0.42825236150080315 H2_DY_Y = -0.19371002899568168 H2_DY_Z = -0.882653011967605 H2_DZ_X = 0.09475460668489433 H2_DZ_Y = 0.9809957575557888 H2_DZ_Z = -0.16931889489815433 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 14 H3_INID2 = 2 H3_OUTID2 = 13 H3_INID2_ORIG = 9 H3_OUTID2_ORIG = 114 H3_INSEQ_CHAR = 9 H3_OUTSEQ_CHAR = 9 # Position: H3_P_X = 54.209083162401214 H3_P_Y = 28.07911219874485 H3_P_Z = 99.60267712989467 # Orientation: H3_DX_X = -0.7196921327742771 H3_DX_Y = 0.33355131387543935 H3_DX_Z = 0.6089226182650691 H3_DY_X = -0.41561265125766766 H3_DY_Y = 0.4955702916036486 H3_DY_Z = -0.762677002534133 H3_DZ_X = -0.5561558757555147 H3_DZ_Y = -0.8019685823595886 H3_DZ_Z = -0.2180298942135579 ############# END of Description of junction: j87