############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS3HS2 FINGERPRINT = 16:152:167 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 822 S1_NAME_ID3 = 829 S1_NUM_ID5_ORIG = 822 S1_NUM_ID3_ORIG = 829 S1_NAME2_ID5 = 824 S1_NAME2_ID3 = 827 S1_NUM2_ID5_ORIG = 824 S1_NUM2_ID3_ORIG = 827 S1_SQ2 = GUUA S1_SQLEN2 = 4 S1_SQ = CUGUUAGA S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 786 S2_NAME_ID3 = 792 S2_NUM_ID5_ORIG = 786 S2_NUM_ID3_ORIG = 792 S2_NAME2_ID5 = 788 S2_NAME2_ID3 = 790 S2_NUM2_ID5_ORIG = 788 S2_NUM2_ID3_ORIG = 790 S2_SQ2 = ACA S2_SQLEN2 = 3 S2_SQ = GGACAAG S2_SQLEN = 7 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 852 S3_NAME_ID3 = 860 S3_NUM_ID5_ORIG = 852 S3_NUM_ID3_ORIG = 860 S3_NAME2_ID5 = 854 S3_NAME2_ID3 = 858 S3_NUM2_ID5_ORIG = 854 S3_NUM2_ID3_ORIG = 858 S3_SQ2 = GUGAU S3_SQLEN2 = 5 S3_SQ = UCGUGAUCU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 824 H1_OUTID2_ORIG = 790 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 106.94586874327413 H1_P_Y = 162.33678080832803 H1_P_Z = 87.83487042017822 # Orientation: H1_DX_X = -0.2729969485813939 H1_DX_Y = 0.6884984827379981 H1_DX_Z = 0.6718947129816684 H1_DY_X = 0.24372973930766761 H1_DY_Y = -0.626137438367607 H1_DY_Z = 0.7406400761851017 H1_DZ_X = 0.9306280031474756 H1_DZ_Y = 0.3659532040328486 H1_DZ_Z = 0.0031260543554765263 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 854 H2_OUTID2_ORIG = 827 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 87.40429272942836 H2_P_Y = 156.11555238590236 H2_P_Z = 89.9293972190357 # Orientation: H2_DX_X = 0.340538113307602 H2_DX_Y = -0.25908080320760973 H2_DX_Z = -0.9038312512821278 H2_DY_X = 0.38406586339210946 H2_DY_Y = -0.8391009068112112 H2_DY_Z = 0.385231204298762 H2_DZ_X = -0.8582116323854905 H2_DZ_Y = -0.478316637383557 H2_DZ_Z = -0.18624174730794607 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 788 H3_OUTID2_ORIG = 858 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 96.4477324360508 H3_P_Y = 152.19260511163728 H3_P_Z = 69.44670132575087 # Orientation: H3_DX_X = -0.6463970361123756 H3_DX_Y = 0.34658939479254514 H3_DX_Z = 0.6797401438215189 H3_DY_X = -0.3326927015618395 H3_DY_Y = 0.6736992692491697 H3_DY_Z = -0.6598824599431481 H3_DZ_X = -0.6866487005977859 H3_DZ_Y = -0.6526906510977994 H3_DZ_Z = -0.3201694487875102 ############# END of Description of junction: j9