############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:128:171 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.72870603890755 H1_P_Y = 155.8338945058832 H1_P_Z = 42.457707433972345 # Orientation: H1_DX_X = 0.17094939188488212 H1_DX_Y = 0.8313818135114843 H1_DX_Z = -0.5287538043140287 H1_DY_X = -0.71213686187928 H1_DY_Y = -0.26661287228500896 H1_DY_Z = -0.6494448908757846 H1_DZ_X = -0.6809092416518538 H1_DZ_Y = 0.48756728406888783 H1_DZ_Z = 0.5464803273117695 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.4318255756171 H2_P_Y = 152.8806387869507 H2_P_Z = 20.739843504400394 # Orientation: H2_DX_X = 0.425839796466299 H2_DX_Y = 0.7697065488245016 H2_DX_Z = -0.47561780500965867 H2_DY_X = 0.20256163208956934 H2_DY_Y = -0.5934198743491663 H2_DY_Z = -0.7789875723865123 H2_DZ_X = -0.8818328940058606 H2_DZ_Y = 0.2353819904412262 H2_DZ_Z = -0.4086148132718215 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 68.11253929248623 H3_P_Y = 148.51781884370138 H3_P_Z = 31.622205408635025 # Orientation: H3_DX_X = 0.6176023645954984 H3_DX_Y = 0.4318519680290933 H3_DX_Z = 0.6573212281338741 H3_DY_X = -0.11751276570630864 H3_DY_Y = -0.775714329086469 H3_DY_Z = 0.6200467962549041 H3_DZ_X = 0.777661924708994 H3_DZ_Y = -0.4601860030023772 H3_DZ_Z = -0.4283348847555999 ############# END of Description of junction: j1