############# Start of Description of junction: j31 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS5 FINGERPRINT = 70 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1869 S1_NAME_ID3 = 1879 S1_NUM_ID5_ORIG = 1869 S1_NUM_ID3_ORIG = 1879 S1_NAME2_ID5 = 1871 S1_NAME2_ID3 = 1877 S1_NUM2_ID5_ORIG = 1871 S1_NUM2_ID3_ORIG = 1877 S1_SQ2 = UCGUACG S1_SQLEN2 = 7 S1_SQ = ACUCGUACGGU S1_SQLEN = 11 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1852 S2_NAME_ID3 = 1860 S2_NUM_ID5_ORIG = 1852 S2_NUM_ID3_ORIG = 1860 S2_NAME2_ID5 = 1854 S2_NAME2_ID3 = 1858 S2_NUM2_ID5_ORIG = 1854 S2_NUM2_ID3_ORIG = 1858 S2_SQ2 = CGCAA S2_SQLEN2 = 5 S2_SQ = ACCGCAAAU S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 1871 H1_OUTID2_ORIG = 1858 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 106.897035821921 H1_P_Y = 124.85143177248504 H1_P_Z = 53.29916769836437 # Orientation: H1_DX_X = 0.21081977255212792 H1_DX_Y = -0.0740167365204627 H1_DX_Z = 0.9747187010701808 H1_DY_X = -0.6954791711328454 H1_DY_Y = 0.6893424969263435 H1_DY_Z = 0.2027699298508594 H1_DZ_X = -0.6869233916685573 H1_DZ_Y = -0.720644464799534 H1_DZ_Z = 0.093849929847309 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 1854 H2_OUTID2_ORIG = 1877 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 115.92083148460173 H2_P_Y = 127.89679496452361 H2_P_Z = 74.13504073011748 # Orientation: H2_DX_X = -0.5928969957684984 H2_DX_Y = 0.051818086593570456 H2_DX_Z = -0.8036093816715066 H2_DY_X = -0.2841107287904805 H2_DY_Y = -0.9472158907530996 H2_DY_Z = 0.14853669610893405 H2_DZ_X = -0.7534946888962253 H2_DZ_Y = 0.31638100797393065 H2_DZ_Z = 0.5763235303183194 ############# END of Description of junction: j31