############# Start of Description of junction: j18 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS8HS2HS4 FINGERPRINT = 29:50:60:62:67:69:85:98:100:122 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 667 S1_NAME_ID3 = 672 S1_NUM_ID5_ORIG = 667 S1_NUM_ID3_ORIG = 672 S1_NAME2_ID5 = 668 S1_NAME2_ID3 = 671 S1_NUM2_ID5_ORIG = 668 S1_NUM2_ID3_ORIG = 671 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = UAGACC S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 583 S2_NAME_ID3 = 590 S2_NUM_ID5_ORIG = 583 S2_NUM_ID3_ORIG = 590 S2_NAME2_ID5 = 584 S2_NAME2_ID3 = 589 S2_NUM2_ID5_ORIG = 584 S2_NUM2_ID3_ORIG = 589 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GCGACUUA S2_SQLEN = 8 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 808 S3_NAME_ID3 = 813 S3_NUM_ID5_ORIG = 808 S3_NUM_ID3_ORIG = 813 S3_NAME2_ID5 = 809 S3_NAME2_ID3 = 812 S3_NUM2_ID5_ORIG = 809 S3_NUM2_ID3_ORIG = 812 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = GGUUCU S3_SQLEN = 6 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 1194 S4_NAME_ID3 = 1199 S4_NUM_ID5_ORIG = 1194 S4_NUM_ID3_ORIG = 1199 S4_NAME2_ID5 = 1195 S4_NAME2_ID3 = 1198 S4_NUM2_ID5_ORIG = 1195 S4_NUM2_ID3_ORIG = 1198 S4_SQ2 = GCGU S4_SQLEN2 = 4 S4_SQ = AGCGUU S4_SQLEN = 6 S4_CHAR = B ## Properties of strand 5 S5_NAME_ID5 = 1246 S5_NAME_ID3 = 1257 S5_NUM_ID5_ORIG = 1246 S5_NUM_ID3_ORIG = 1257 S5_NAME2_ID5 = 1247 S5_NAME2_ID3 = 1256 S5_NUM2_ID5_ORIG = 1247 S5_NUM2_ID3_ORIG = 1256 S5_SQ2 = AGUGCGAAUG S5_SQLEN2 = 10 S5_SQ = AAGUGCGAAUGC S5_SQLEN = 12 S5_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 668 H1_OUTID2_ORIG = 589 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 95.779948174928 H1_P_Y = -2.0715559624381505 H1_P_Z = 12.031601051422316 # Orientation: H1_DX_X = 0.7710031442548484 H1_DX_Y = 0.6295132711428089 H1_DX_Z = 0.09626626098593505 H1_DY_X = 0.2136637220422699 H1_DY_Y = -0.11330479484017353 H1_DY_Z = -0.9703142982298445 H1_DZ_X = -0.5999182989642691 H1_DZ_Y = 0.7686839824799971 H1_DZ_Z = -0.22186250166829602 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 809 H2_OUTID2_ORIG = 671 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 84.31480348433742 H2_P_Y = -10.24206055137221 H2_P_Z = -1.900969195153266 # Orientation: H2_DX_X = 0.8246294376433951 H2_DX_Y = -0.5277058135172066 H2_DX_Z = 0.20374706121087605 H2_DY_X = -0.5366576988215854 H2_DY_Y = -0.6159456839746706 H2_DY_Z = 0.5767230086345532 H2_DZ_X = -0.17884296147022383 H2_DZ_Y = -0.5849251992974143 H2_DZ_Z = -0.791124330531833 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1195 H3_OUTID2_ORIG = 812 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 83.29436336757405 H3_P_Y = -17.91932998714121 H3_P_Z = 33.245775127631056 # Orientation: H3_DX_X = -0.38219442645240065 H3_DX_Y = -0.1511545920799371 H3_DX_Z = -0.9116357329996774 H3_DY_X = 0.06481179503239787 H3_DY_Y = -0.9884865462574695 H3_DY_Z = 0.13672519552976325 H3_DZ_X = -0.9218062983151043 H3_DZ_Y = -0.0068291405842870745 H3_DZ_Z = 0.38759064904287754 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1247 H4_OUTID2_ORIG = 1198 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = 92.84110812635855 H4_P_Y = -33.812880440362584 H4_P_Z = 1.5409487279901661 # Orientation: H4_DX_X = -0.934901223890094 H4_DX_Y = 0.3537356986307927 H4_DX_Z = -0.028822856953913734 H4_DY_X = -0.02324788360401442 H4_DY_Y = -0.1420752251466908 H4_DY_Z = -0.9895828243797744 H4_DZ_X = -0.3541457856261161 H4_DZ_Y = -0.9244921232296619 H4_DZ_Z = 0.14104990822244656 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 584 H5_OUTID2_ORIG = 1256 H5_INSEQ_CHAR = B H5_OUTSEQ_CHAR = B # Position: H5_P_X = 77.46170723003634 H5_P_Y = -29.957498644922907 H5_P_Z = 15.002816804569564 # Orientation: H5_DX_X = 0.7187309872901437 H5_DX_Y = -0.10832370767449007 H5_DX_Z = -0.6867981816113033 H5_DY_X = 0.3103675719535346 H5_DY_Y = -0.8339286538734925 H5_DY_Z = 0.4563277008120501 H5_DZ_X = -0.6221717915404099 H5_DZ_Y = -0.5411367429812906 H5_DZ_Z = -0.5657501985920916 ############# END of Description of junction: j18