############# Start of Description of junction: j54 # Number of strands: NUM_STRANDS = 3 LILLEY = HS1HS16HS3 FINGERPRINT = 49:125:146 LOOP_LENGTH_SUM = 20 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2328 S1_NAME_ID3 = 2349 S1_NUM_ID5_ORIG = 2328 S1_NUM_ID3_ORIG = 2349 S1_NAME2_ID5 = 2330 S1_NAME2_ID3 = 2347 S1_NUM2_ID5_ORIG = 2330 S1_NUM2_ID3_ORIG = 2347 S1_SQ2 = GGCAUAAGCCAGCUUGAC S1_SQLEN2 = 18 S1_SQ = AUGGCAUAAGCCAGCUUGACUG S1_SQLEN = 22 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 2379 S2_NAME_ID3 = 2387 S2_NUM_ID5_ORIG = 2379 S2_NUM_ID3_ORIG = 2387 S2_NAME2_ID5 = 2381 S2_NAME2_ID3 = 2385 S2_NUM2_ID5_ORIG = 2381 S2_NUM2_ID3_ORIG = 2385 S2_SQ2 = AGGUC S2_SQLEN2 = 5 S2_SQ = GCAGGUCAU S2_SQLEN = 9 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 2368 S3_NAME_ID3 = 2374 S3_NUM_ID5_ORIG = 2368 S3_NUM_ID3_ORIG = 2374 S3_NAME2_ID5 = 2370 S3_NAME2_ID3 = 2372 S3_NUM2_ID5_ORIG = 2370 S3_NUM2_ID3_ORIG = 2372 S3_SQ2 = GGU S3_SQLEN2 = 3 S3_SQ = CAGGUGC S3_SQLEN = 7 S3_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 2330 H1_OUTID2_ORIG = 2385 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 19.650369969099394 H1_P_Y = 77.1419813824192 H1_P_Z = -5.68916809153487 # Orientation: H1_DX_X = 0.37241081068488313 H1_DX_Y = -0.5628221422622914 H1_DX_Z = 0.7379305009716823 H1_DY_X = -0.8430587135477268 H1_DY_Y = -0.5375999646853415 H1_DY_Z = 0.015436433577317388 H1_DZ_X = 0.38802344464772887 H1_DZ_Y = -0.627867433579425 H1_DZ_Z = -0.6747001498844503 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 22 H2_INID2 = 3 H2_OUTID2 = 20 H2_INID2_ORIG = 2370 H2_OUTID2_ORIG = 2347 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 43.55292606957112 H2_P_Y = 96.24320436648806 H2_P_Z = -8.113672835649187 # Orientation: H2_DX_X = 0.8976371800216825 H2_DX_Y = -0.42999652423635837 H2_DX_Z = 0.09669789132847129 H2_DY_X = 0.4047296016374986 H2_DY_Y = 0.7173659693162762 H2_DY_Z = -0.5670802550126997 H2_DZ_X = 0.17447476207483703 H2_DZ_Y = 0.5481688199921422 H2_DZ_Z = 0.8179666877002756 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 2381 H3_OUTID2_ORIG = 2372 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 38.302371731780255 H3_P_Y = 83.67915227243408 H3_P_Z = -24.42396148545003 # Orientation: H3_DX_X = 0.6226188516461235 H3_DX_Y = -0.7730031959260799 H3_DX_Z = 0.12170383996792822 H3_DY_X = -0.6740267398028976 H3_DY_Y = -0.6087759236570065 H3_DY_Z = -0.4184254160614884 H3_DZ_X = 0.39753455146130534 H3_DZ_Y = 0.1784879095726808 H3_DZ_Z = -0.9000601905044086 ############# END of Description of junction: j54