#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS3HS1
FINGERPRINT = 17:39:149:150:163:164
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  30
S1_NAME_ID3 = 33
S1_NUM_ID5_ORIG =  30
S1_NUM_ID3_ORIG = 33
S1_NAME2_ID5 =  31
S1_NAME2_ID3 = 32
S1_NUM2_ID5_ORIG =  31
S1_NUM2_ID3_ORIG = 32
S1_SQ2 = UU
S1_SQLEN2 = 2
S1_SQ = AUUU
S1_SQLEN = 4
S1_CHAR = E
## Properties of strand 2
S2_NAME_ID5 =  5
S2_NAME_ID3 = 8
S2_NUM_ID5_ORIG =  5
S2_NUM_ID3_ORIG = 8
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 7
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 7
S2_SQ2 = GA
S2_SQLEN2 = 2
S2_SQ = GGAU
S2_SQLEN = 4
S2_CHAR = E
## Properties of strand 3
S3_NAME_ID5 =  35
S3_NAME_ID3 = 41
S3_NUM_ID5_ORIG =  35
S3_NUM_ID3_ORIG = 41
S3_NAME2_ID5 =  36
S3_NAME2_ID3 = 40
S3_NUM2_ID5_ORIG =  36
S3_NUM2_ID3_ORIG = 40
S3_SQ2 = AGAAA
S3_SQLEN2 = 5
S3_SQ = AAGAAAG
S3_SQLEN = 7
S3_CHAR = E
## Properties of strand 4
S4_NAME_ID5 =  50
S4_NAME_ID3 = 54
S4_NUM_ID5_ORIG =  50
S4_NUM_ID3_ORIG = 54
S4_NAME2_ID5 =  51
S4_NAME2_ID3 = 53
S4_NUM2_ID5_ORIG =  51
S4_NUM2_ID3_ORIG = 53
S4_SQ2 = UCA
S4_SQLEN2 = 3
S4_SQ = CUCAC
S4_SQLEN = 5
S4_CHAR = E
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 31
H1_OUTID2_ORIG = 7
H1_INSEQ_CHAR = E
H1_OUTSEQ_CHAR = E
# Position:
H1_P_X = 62.87419520015486
H1_P_Y = 74.81093396044852
H1_P_Z = 185.8129688379117
# Orientation:
H1_DX_X = -0.29994121110045313
H1_DX_Y = 0.5714898713160892
H1_DX_Z = 0.7638289054930283
H1_DY_X = 0.31379865844589716
H1_DY_Y = -0.6970288112768515
H1_DY_Z = 0.6447334629190209
H1_DZ_X = 0.9008693977714799
H1_DZ_Y = 0.4330706215308311
H1_DZ_Z = 0.029734910891875188
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 36
H2_OUTID2_ORIG = 32
H2_INSEQ_CHAR = E
H2_OUTSEQ_CHAR = E
# Position:
H2_P_X = 48.48832032389004
H2_P_Y = 66.5824556719746
H2_P_Z = 189.22068454953532
# Orientation:
H2_DX_X = 0.11266089098950971
H2_DX_Y = 0.8693715115246334
H2_DX_Z = 0.4811451949160812
H2_DY_X = -0.2717794290925042
H2_DY_Y = 0.49272394317790713
H2_DY_Z = -0.8266553439864595
H2_DZ_X = -0.9557423635915683
H2_DZ_Y = -0.03763363879014037
H2_DZ_Z = 0.2917880115217315
## Properties of helix 3
H3_INID = 1
H3_OUTID = 7
H3_INID2 = 2
H3_OUTID2 = 6
H3_INID2_ORIG = 51
H3_OUTID2_ORIG = 40
H3_INSEQ_CHAR = E
H3_OUTSEQ_CHAR = E
# Position:
H3_P_X = 65.51088467726866
H3_P_Y = 84.96887537833014
H3_P_Z = 178.0025836616708
# Orientation:
H3_DX_X = -0.13877573179546232
H3_DX_Y = -0.2969074817308268
H3_DX_Z = -0.9447683544429708
H3_DY_X = -0.37687325868836297
H3_DY_Y = 0.8980520847698159
H3_DY_Z = -0.22686780275350316
H3_DZ_X = 0.9158099383334104
H3_DZ_Y = 0.32457418309662955
H3_DZ_Z = -0.23652432542323254
## Properties of helix 4
H4_INID = 1
H4_OUTID = 5
H4_INID2 = 2
H4_OUTID2 = 4
H4_INID2_ORIG = 6
H4_OUTID2_ORIG = 53
H4_INSEQ_CHAR = E
H4_OUTSEQ_CHAR = E
# Position:
H4_P_X = 48.16114892446575
H4_P_Y = 82.92527397963832
H4_P_Z = 175.2357353000641
# Orientation:
H4_DX_X = 0.3392225642991349
H4_DX_Y = -0.9337377768465274
H4_DX_Z = 0.11428830193864314
H4_DY_X = -0.3144567132863969
H4_DY_Y = 0.0019487509345594844
H4_DY_Z = 0.9492698129820383
H4_DZ_X = -0.8865918042365593
H4_DZ_Y = -0.35795246396622815
H4_DZ_Z = -0.2929590520893157
#############  END of Description of junction: j1