############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS1 FINGERPRINT = 166 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 3 S1_NAME_ID3 = 7 S1_NUM_ID5_ORIG = 3 S1_NUM_ID3_ORIG = 7 S1_NAME2_ID5 = 4 S1_NAME2_ID3 = 6 S1_NUM2_ID5_ORIG = 4 S1_NUM2_ID3_ORIG = 6 S1_SQ2 = GUC S1_SQLEN2 = 3 S1_SQ = CGUCA S1_SQLEN = 5 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 21 S2_NAME_ID3 = 25 S2_NUM_ID5_ORIG = 21 S2_NUM_ID3_ORIG = 25 S2_NAME2_ID5 = 22 S2_NAME2_ID3 = 24 S2_NUM2_ID5_ORIG = 22 S2_NUM2_ID3_ORIG = 24 S2_SQ2 = GUC S2_SQLEN2 = 3 S2_SQ = AGUCG S2_SQLEN = 5 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 4 H1_OUTID2_ORIG = 24 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 0.9070115410568009 H1_P_Y = 16.638623966022113 H1_P_Z = -4.626428228042915 # Orientation: H1_DX_X = -0.6321311584034932 H1_DX_Y = -0.24116912435201598 H1_DX_Z = -0.736374668246226 H1_DY_X = -0.7420776519127508 H1_DY_Y = -0.08508293167968262 H1_DY_Z = 0.6648922117670266 H1_DZ_X = -0.22300438808937295 H1_DZ_Y = 0.9667462687779427 H1_DZ_Z = -0.1251826453499536 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 5 H2_INID2 = 2 H2_OUTID2 = 4 H2_INID2_ORIG = 22 H2_OUTID2_ORIG = 6 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 4.475548223690027 H2_P_Y = 0.7655002544383844 H2_P_Z = -3.5284727544440413 # Orientation: H2_DX_X = -0.10106263791818204 H2_DX_Y = 0.09152035705183614 H2_DX_Z = -0.99066158069349 H2_DY_X = 0.9610770770402608 H2_DY_Y = 0.2663410240066504 H2_DY_Z = -0.0734391647476782 H2_DZ_X = 0.25713264126665525 H2_DZ_Y = -0.9595240920248921 H2_DZ_Z = -0.11487524371700175 ############# END of Description of junction: j2