RNAJunction Database - Junction Profile:9461
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9461: 1YL4_j2_A-G515_A-G529

Primary Citation: (from PDB entry 1YL4)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2I2U j2 A-G515 A-G529 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 42°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.20032Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGUAAUACGG 12nt

Strand 2: Chain A: CCGUGCCAGC 10nt

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