RNAJunction Database - Junction Profile:8550
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8550: 1Y69_j2_9-G25_9-G58

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VP0 j2 A-G25 A-G58 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 126°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.32129Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 9: GUGGAACCAC 10nt

Strand 2: Chain 9: GUGAAACAC 9nt

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