RNAJunction Database - Junction Profile:8543
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8543: 1Y69_j2_0-U696_0-U786

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJO j2 0-U696 0-U786 
NC-IUBMB Classification:HS5HS20Cluster Page
Angles: 150°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.48562Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UUUAGGAGUGAAAAGCUAACCGAACC 26nt

Strand 2: Chain 0: GGUGAGCUAAG 11nt

Valid XHTML 1.0 Transitional