RNAJunction Database - Junction Profile:7940
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7940: 1VS7_j3_A-A44_A-G357_A-U387

Primary Citation: (from PDB entry 1VS7)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:2I2U j3 A-A44 A-G357 A-U387 
NC-IUBMB Classification:Cluster Page
Angles: 25:130:140°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.71981Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAGUGGGGAAUAUUGCACAAUGGG 24nt

Strand 2: Chain A: GCAGGCCUAACACAUG 16nt

Strand 3: Chain A: CCUGAUGCAGCCAUGC 16nt

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