RNAJunction Database - Junction Profile:6938

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6938: 1VQ8_j3_0-A788_0-G824_0-G854

Primary Citation: (from PDB entry 1VQ8)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1JJ2 j3 0-A788 0-G824 0-G854 
NC-IUBMB Classification:Cluster Page
Angles: 19:153:172°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.60502Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CUGUUAGA 8nt

Strand 2: Chain 0: GGACAAG 7nt

Strand 3: Chain 0: UCGUGAUCU 9nt

Valid XHTML 1.0 Transitional