RNAJunction Database - Junction Profile:6553
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6553: 1VQ5_j2_0-C2329_0-G2352

Primary Citation: (from PDB entry 1VQ5)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1YIJ j2 0-C2329 0-G2352 
NC-IUBMB Classification:HS2HS18Cluster Page
Angles: 71°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.54802Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCGAAGAGUGCAAGAGCAAAAGAU 24nt

Strand 2: Chain 0: AUCUCAGC 8nt

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