RNAJunction Database - Junction Profile:633

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 633: 1HNW_j4_A-G944_A-A1236_A-C1296_A-G1334

Primary Citation: (from PDB entry 1HNW)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1J5E j4 A-G944 A-A1236 A-C1296 A-G1334 
NC-IUBMB Classification:Cluster Page
Angles: 24:45:63:65:87:106°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.79319Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUACAAUGCC 10nt

Strand 2: Chain A: GUGGAG 6nt

Strand 3: Chain A: GGCCCAGUUCGG 12nt

Strand 4: Chain A: AAGCCGGAAU 10nt

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