RNAJunction Database - Junction Profile:5663
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5663: 1S1I_j4_3-C2319_3-U2377_3-G2407_3-G2418

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1YIJ j4 0-C2319 0-U2377 0-G2407 0-G2418 
NC-IUBMB Classification:Cluster Page
Angles: 38:44:81:81:116:160°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.70499Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: CUUGACA 7nt

Strand 2: Chain 3: CCUAUGG 7nt

Strand 3: Chain 3: UGACG 5nt

Strand 4: Chain 3: CGUGG 5nt

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