RNAJunction Database - Junction Profile:5552
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5552: 1S1H_j3_A-G933_A-C1344_A-A1374

Primary Citation: (from PDB entry 1S1H)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1IBL j3 A-G933 A-C1344 A-A1374 
NC-IUBMB Classification:Cluster Page
Angles: 53:84:123°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.75156Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGCUAGUAA 9nt

Strand 2: Chain A: CCGCACAAGCG 11nt

Strand 3: Chain A: UGAAUACGUUCCCGG 15nt

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