RNAJunction Database - Junction Profile:4589

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4589: 1PNU_j4_0-G30_0-G485_0-A507_0-A513

Primary Citation: (from PDB entry 1PNU)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1PNY j4 0-G30 0-G485 0-A507 0-A513 
NC-IUBMB Classification:Cluster Page
Angles: 53:67:113:137:138:156°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.40527Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGUGAAAAGAAC 12nt

Strand 2: Chain 0: UGCC 4nt

Strand 3: Chain 0: GAGUG 5nt

Strand 4: Chain 0: AAGAGAACCU 10nt

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