RNAJunction Database - Junction Profile:2433
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2433: 1KC8_j2_A-C2329_A-G2352

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1YIJ j2 0-C2329 0-G2352 
NC-IUBMB Classification:HS2HS18Cluster Page
Angles: 72°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.55759Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGAAGAGUGCAAGAGCAAAAGAU 24nt

Strand 2: Chain A: AUCUCAGC 8nt

Valid XHTML 1.0 Transitional