RNAJunction Database - Junction Profile:11304
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11304: 2HGQ_j7_A-U2074_A-U2243_A-C2258_A-C2281_A-C2343_A-G2370_A-A2422

Primary Citation: (from PDB entry 2HGQ)

L.JENNER G.YUSUPOVA B.REES D.MORAS M.YUSUPOV STRUCTURAL BASIS FOR MESSENGER RNA MOVEMENT ON THE RIBOSOME. NATURE V. 444 391 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:7-wayCluster:2HGJ j7 A-U2074 A-U2243 A-C2258 A-C2281 A-C2343 A-G2370 A-A2422 
NC-IUBMB Classification:Cluster Page
Angles: 20:21:29:32:37:40:57:61:64:76:79:114:120:125:138:139:142:145:148:156:177°
Fit Criteria: A
Extracted Structure:Download

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGUUUGAC 8nt

Strand 2: Chain A: GCUUUACU 8nt

Strand 3: Chain A: GUCGCC 6nt

Strand 4: Chain A: GGCGCCCAAAGGU 13nt

Strand 5: Chain A: GCCUGACUG 9nt

Strand 6: Chain A: CAGGGGCGAAAGCCGGGCCUAGUGAACCG 29nt

Strand 7: Chain A: CGAUCAACGGAUAAAAGU 18nt

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